RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA429937", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA429937 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
425516 425516 PRJNA429937_P_NODE_10241_length_1130_cov_23.831063_g6019_i0 PRJNA429937 10241 1130 23.831063 269.2910119 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 451 1.79e-147   NR HVB81057.1 2785449 g6019 i0 80.1 0.974336283185841 367 72 97.4 1 24 1124 385 750 HVB81057.1 chemotaxis protein CheB [Candidatus Binataceae bacterium] diamond 1101 451 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
427096 427096 PRJNA429937_P_NODE_61241_length_441_cov_3.951456_g41296_i0 PRJNA429937 61241 441 3.951456 17.42592096 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 144 3.01e-39   NR MEA2680644.1 2785449 g41296 i0 62.6 0.891156462585034 131 43 85.7 2 379 2 12 141 MEA2680644.1 iron complex outerrane recepter protein [Candidatus Binataceae bacterium] diamond 393 144 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
27802380 27802380 PRJNA429937_P_NODE_29124_length_676_cov_3.114374_g17622_i0 PRJNA429937 29124 676 3.114374 21.05316824 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 89.4 6.1e-17   NR HVQ75218.1 2838779 g17622 i0 50.6 3.99852071005917 89 37 39.1 2 671 408 265 347 HVQ75218.1 amidohydrolase family protein [Candidatus Binatia bacterium] diamond 2703 89.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;