RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

16 rows where bioproject = "PRJNA421571" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA421571 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
424435 424435 PRJNA421571_P_NODE_95801_length_248_cov_1.760000_g93252_i0 PRJNA421571 95801 248 1.76 4.3648 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 436 5.3e-118   NTclustered gi|68479954|gb|DQ076149.1| 6182 g93252 i0 98.387 1 248 4 100 0 1 248 398 151 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 248 436 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18274458 18274458 PRJNA421571_P_NODE_36015_length_508_cov_2.291954_g33472_i0 PRJNA421571 36015 508 2.291954 11.64312632 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.004   NTclustered gi|690539951|emb|LN092357.1| 99802 g33472 i0 100 0.0590551181102362 30 0 6 0 446 475 3623 3594 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0087927 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
20211690 20211690 PRJNA421571_P_NODE_20716_length_777_cov_4.048295_g18407_i0 PRJNA421571 20716 777 4.048295 31.45525215 Opisthokonta 33154 Platyhelminthes Platyhelminthes 244 3.7e-78   NR KAA0196388.1 27845 g18407 i0 68.9 14.5135135135135 167 52 64.5 0 727 227 10 176 KAA0196388.1 Ribosomal protein L11 [Fasciolopsis buskii] diamond 11277 244 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciolopsis Fasciolopsis buskii
26822637 26822637 PRJNA421571_P_NODE_40221_length_464_cov_2.421995_g37673_i0 PRJNA421571 40221 464 2.421995 11.2380568 Schistosoma mekongi 38744 Platyhelminthes Platyhelminthes 160 6.66e-47   NR KAK4469792.1 38744 g37673 i0 62.4 8.4051724137931 117 44 75.6 0 114 464 1 117 KAK4469792.1 hypothetical protein MN116_007308 [Schistosoma mekongi] diamond 3900 160 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mekongi
27028941 27028941 PRJNA421571_P_NODE_101902_length_244_cov_0.900585_g99353_i0 PRJNA421571 101902 244 0.900585 2.1974274 Metazoa 33208 Platyhelminthes Platyhelminthes 47.4 8.7e-4   NR TPP61754.1 46835 g99353 i0 43.5 2.77868852459016 69 35 82.4 4 243 43 223 289 TPP61754.1 hypothetical protein FGIG_11340, partial [Fasciola gigantica] diamond 678 47.8 0.99163179916318 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola gigantica
27486481 27486481 PRJNA421571_P_NODE_83263_length_269_cov_1.571429_g80714_i0 PRJNA421571 83263 269 1.571429 4.22714401 Fasciola hepatica 6192 Platyhelminthes Platyhelminthes 66.2 2.1e-10   NR AAF76330.1 6192 g80714 i0 39.6 4.05947955390335 91 53 99.3 1 267 1 154 244 AAF76330.1 cathepsin L [Fasciola hepatica] diamond 1092 66.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
27945109 27945109 PRJNA421571_P_NODE_60645_length_337_cov_1.166667_g58096_i0 PRJNA421571 60645 337 1.166667 3.93166779 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 161 3.13e-43   NR VDL63085.1 6216 g58096 i0 71.8 12.5964391691395 110 31 97.9 0 8 337 658 767 VDL63085.1 unnamed protein product [Hymenolepis diminuta] diamond 4245 161 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta
28244065 28244065 PRJNA421571_P_NODE_84086_length_267_cov_2.087629_g81537_i0 PRJNA421571 84086 267 2.087629 5.57396943 Paragonimus skrjabini miyazakii 59628 Platyhelminthes Platyhelminthes 72.4 1.27e-12   NR KAF7262668.1 59628 g81537 i0 76.9 0.876404494382023 39 9 43.8 0 265 149 295 333 KAF7262668.1 hypothetical protein EG68_00058 [Paragonimus skrjabini miyazakii] diamond 234 72.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus skrjabini miyazakii
28560114 28560114 PRJNA421571_P_NODE_80347_length_276_cov_1.463054_g77798_i0 PRJNA421571 80347 276 1.463054 4.03802904 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 104 2.0399999999999994e-24   NR PAA46757.1 282301 g77798 i0 56.5 2.97826086956522 92 39 98.9 1 3 275 102 193 PAA46757.1 hypothetical protein BOX15_Mlig000518g3, partial [Macrostomum lignano] diamond 822 104 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
28765867 28765867 PRJNA421571_P_NODE_102567_length_244_cov_0.900585_g100018_i0 PRJNA421571 102567 244 0.900585 2.1974274 Trematoda 6178 Platyhelminthes Platyhelminthes 89 1.04e-18   NR GAA50816.1 79923 g100018 i0 48.1 3.88524590163934 79 41 97.1 0 2 238 269 347 GAA50816.1 26S proteasome regulatory subunit N9 [Clonorchis sinensis] diamond 948 89.4 0.995525727069351 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Clonorchis Clonorchis sinensis
29065256 29065256 PRJNA421571_P_NODE_46048_length_416_cov_4.620991_g43500_i0 PRJNA421571 46048 416 4.620991 19.22332256 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 184 2.62e-57   NR AAY97887.1 6182 g43500 i0 72.7 0.923076923076923 128 35 92.3 0 409 26 1 128 AAY97887.1 unknown [Schistosoma japonicum] diamond 384 184 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
31197635 31197635 PRJNA421571_P_NODE_103335_length_243_cov_0.905882_g100786_i0 PRJNA421571 103335 243 0.905882 2.20129326 Metazoa 33208 Platyhelminthes Platyhelminthes 77.4 2.78e-15   NR THD24244.1 6192 g100786 i0 48.8 7.8641975308642 80 37 98.8 1 3 242 63 138 THD24244.1 RAN binding protein 1 [Fasciola hepatica] diamond 1911 77.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
31577690 31577690 PRJNA421571_P_NODE_96196_length_248_cov_0.880000_g93647_i0 PRJNA421571 96196 248 0.88 2.1824 Metazoa 33208 Platyhelminthes Platyhelminthes 60.1 2.59e-8   NR XP_018648353.1 6183 g93647 i0 37 5.87903225806452 81 50 98 1 244 2 109 188 XP_018648353.1 putative clathrin heavy chain [Schistosoma mansoni] diamond 1458 60.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
32130628 32130628 PRJNA421571_P_NODE_106158_length_241_cov_0.916667_g103609_i0 PRJNA421571 106158 241 0.916667 2.20916747 Heterobilharzia americana 39320 Platyhelminthes Platyhelminthes 43.9 0.0144   NR CAH8582478.1 39320 g103609 i0 45 0.49792531120332 40 22 49.8 0 10 129 236 275 CAH8582478.1 unnamed protein product [Heterobilharzia americana] diamond 120 43.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Heterobilharzia Heterobilharzia americana
32273786 32273786 PRJNA421571_P_NODE_100338_length_245_cov_1.168605_g97789_i0 PRJNA421571 100338 245 1.168605 2.86308225 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 77.8 8.49e-15   NR THD21334.1 6192 g97789 i0 61.7 5.65714285714286 60 20 71 2 6 179 240 298 THD21334.1 Secreted cathepsin L 2 [Fasciola hepatica] diamond 1386 78.2 0.994884910485933 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola hepatica
32415324 32415324 PRJNA421571_P_NODE_103959_length_243_cov_0.905882_g101410_i0 PRJNA421571 103959 243 0.905882 2.20129326 Paragonimus westermani 34504 Platyhelminthes Platyhelminthes 47 9.13e-4   NR KAA3677463.1 34504 g101410 i0 36.5 1.92592592592593 74 31 71.6 3 49 222 31 104 KAA3677463.1 uncharacterized protein DEA37_0004637 [Paragonimus westermani] diamond 468 47 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus westermani

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;