RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA421571", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA421571 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26632488 26632488 PRJNA421571_P_NODE_84501_length_266_cov_2.393782_g81952_i0 PRJNA421571 84501 266 2.393782 6.36746012 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 107 2.3e-26   NR MCX6656760.1 2026714 g81952 i0 62.5 0.992481203007519 88 30 99.2 1 3 266 128 212 MCX6656760.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 264 107 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27281953 27281953 PRJNA421571_P_NODE_37723_length_489_cov_2.514423_g35179_i0 PRJNA421571 37723 489 2.514423 12.29552847 root 1 Root_unresolved Root_unresolved 77.4 9.37e-14   NR MCW4000749.1 2026714 g35179 i0 34.6 1.61963190184049 130 82 79.1 2 452 66 9 136 MCW4000749.1 tryptophan-rich sensory protein [Candidatus Bathyarchaeota archaeon] diamond 792 77.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;