contig_metadata
29 rows where bioproject = "PRJNA421571", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6189157 | 6189157 | PRJNA421571_P_NODE_69465_length_305_cov_1.905172_g66916_i0 | PRJNA421571 | 69465 | 305 | 1.905172 | 5.8107746 | Acidobacteriaceae | 204434 | Bacteria | Bacteria | 564 | 2.95e-156 | NTclustered | gi|2304905231|gb|CP073696.1| | 2051959 | g66916 | i0 | 100 | 104.603278688525 | 305 | 0 | 100 | 0 | 1 | 305 | 3199955 | 3199651 | Tunturiibacter lichenicola strain DSM 104462 chromosome, complete genome | blastn | 31904 | 564 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Tunturiibacter | Tunturiibacter lichenicola | ||
| 8076700 | 8076700 | PRJNA421571_P_NODE_55027_length_362_cov_1.065744_g52478_i0 | PRJNA421571 | 55027 | 362 | 1.065744 | 3.85799328 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 99 | 1.62e-23 | NR | MBA3887688.1 | 1978231 | g52478 | i0 | 46.2 | 0.986187845303867 | 119 | 55 | 97 | 3 | 2 | 352 | 33 | 144 | MBA3887688.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 357 | 99 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 9351907 | 9351907 | PRJNA421571_P_NODE_71128_length_300_cov_1.356828_g68579_i0 | PRJNA421571 | 71128 | 300 | 1.356828 | 4.070484 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 117 | 2.19e-28 | NR | MEY3284333.1 | 1978231 | g68579 | i0 | 58.6 | 11.77 | 99 | 41 | 99 | 0 | 3 | 299 | 226 | 324 | MEY3284333.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 3531 | 117 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 10628320 | 10628320 | PRJNA421571_P_NODE_96609_length_248_cov_0.880000_g94060_i0 | PRJNA421571 | 96609 | 248 | 0.88 | 2.1824 | Acidobacteria bacterium Mor1 | 1660251 | Bacteria | Bacteria | 158 | 4.62e-34 | NTclustered | gi|1037405666|gb|CP011806.1| | 1660251 | g94060 | i0 | 83.908 | 18.6854838709677 | 174 | 19 | 69 | 7 | 19 | 190 | 5680132 | 5679966 | Acidobacteria bacterium Mor1 chromosome | blastn | 4634 | 158 | 1 | Bacteria | Acidobacteriota subdivision 22 | Pseudomonadati | Acidobacteriota | Acidobacteria bacterium Mor1 | |||||
| 11902391 | 11902391 | PRJNA421571_P_NODE_62470_length_330_cov_1.447471_g59921_i0 | PRJNA421571 | 62470 | 330 | 1.447471 | 4.7766543 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 100 | 1.05e-24 | NR | MDQ7008653.1 | 1978231 | g59921 | i0 | 78.3 | 0.627272727272727 | 69 | 15 | 62.7 | 0 | 3 | 209 | 43 | 111 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 207 | 100 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 14450804 | 14450804 | PRJNA421571_P_NODE_105552_length_242_cov_0.911243_g103003_i0 | PRJNA421571 | 105552 | 242 | 0.911243 | 2.20520806 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 75.1 | 4.44e-15 | NR | HXP08495.1 | 2052142 | g103003 | i0 | 59.6 | 1.26446280991736 | 52 | 21 | 64.5 | 0 | 27 | 182 | 81 | 132 | HXP08495.1 hypothetical protein [Acidobacteriaceae bacterium] | diamond | 306 | 75.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium | |||
| 18275826 | 18275826 | PRJNA421571_P_NODE_84335_length_267_cov_1.195876_g81786_i0 | PRJNA421571 | 84335 | 267 | 1.195876 | 3.19298892 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 127 | 1.0299999999999998e-31 | NR | MCB1050766.1 | 1978231 | g81786 | i0 | 75 | 3.95505617977528 | 88 | 20 | 98.9 | 1 | 266 | 3 | 411 | 496 | MCB1050766.1 arginine--tRNA ligase [Acidobacteriota bacterium] | diamond | 1056 | 127 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 19549343 | 19549343 | PRJNA421571_P_NODE_57536_length_350_cov_1.234657_g54987_i0 | PRJNA421571 | 57536 | 350 | 1.234657 | 4.3212995 | Terriglobus saanensis | 870903 | Bacteria | Bacteria | 52.8 | 0.033 | NTclustered | gi|319923767|gb|CP002467.1| | 401053 | g54987 | i0 | 100 | 0.08 | 28 | 0 | 8 | 0 | 286 | 313 | 4098126 | 4098099 | Terriglobus saanensis SP1PR4, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Terriglobus | Terriglobus saanensis | ||
| 23375627 | 23375627 | PRJNA421571_P_NODE_58579_length_345_cov_1.772059_g56030_i0 | PRJNA421571 | 58579 | 345 | 1.772059 | 6.11360355 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 124 | 4.94e-34 | NR | MDQ7008654.1 | 1978231 | g56030 | i0 | 78.2 | 0.756521739130435 | 87 | 18 | 75.7 | 1 | 343 | 83 | 27 | 112 | MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 261 | 124 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 26917465 | 26917465 | PRJNA421571_P_NODE_79602_length_278_cov_1.375610_g77053_i0 | PRJNA421571 | 79602 | 278 | 1.37561 | 3.8241958 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 53.1 | 1.25e-5 | NR | HEX3085720.1 | 2283092 | g77053 | i0 | 39 | 2.88129496402878 | 100 | 51 | 97.1 | 5 | 9 | 278 | 313 | 412 | HEX3085720.1 tetratricopeptide repeat protein [Pyrinomonadaceae bacterium] | diamond | 801 | 53.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 26917472 | 26917472 | PRJNA421571_P_NODE_85322_length_265_cov_0.875000_g82773_i0 | PRJNA421571 | 85322 | 265 | 0.875 | 2.31875 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 88.2 | 2.29e-20 | NR | MDQ7008653.1 | 1978231 | g82773 | i0 | 60.2 | 2.79622641509434 | 83 | 32 | 92.8 | 1 | 248 | 3 | 25 | 107 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 741 | 88.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27250262 | 27250262 | PRJNA421571_P_NODE_73663_length_293_cov_0.881818_g71114_i0 | PRJNA421571 | 73663 | 293 | 0.881818 | 2.58372674 | Terriglobia | 204432 | Bacteria | Bacteria | 134 | 3.04e-36 | NR | PYX86855.1 | 1978231 | g71114 | i0 | 63.9 | 12.9112627986348 | 97 | 35 | 99.3 | 0 | 291 | 1 | 8 | 104 | PYX86855.1 MAG: hypothetical protein DMG68_13790 [Acidobacteriota bacterium] | diamond | 3783 | 135 | 0.992592592592593 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27928524 | 27928524 | PRJNA421571_P_NODE_87465_length_260_cov_1.288770_g84916_i0 | PRJNA421571 | 87465 | 260 | 1.28877 | 3.350802 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 45.1 | 0.00686 | NR | HSP33943.1 | 2651171 | g84916 | i0 | 35.4 | 1.89230769230769 | 82 | 46 | 94.6 | 3 | 14 | 259 | 391 | 465 | HSP33943.1 oligopeptidase B [Thermoanaerobaculia bacterium] | diamond | 492 | 45.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 28180804 | 28180804 | PRJNA421571_P_NODE_101226_length_245_cov_0.895349_g98677_i0 | PRJNA421571 | 101226 | 245 | 0.895349 | 2.19360505 | Terriglobales bacterium | 2282142 | Bacteria | Bacteria | 42.7 | 0.0378 | NR | HKW17502.1 | 2282142 | g98677 | i0 | 52.6 | 0.46530612244898 | 38 | 18 | 46.5 | 0 | 33 | 146 | 259 | 296 | HKW17502.1 tetratricopeptide repeat protein [Terriglobales bacterium] | diamond | 114 | 42.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium | ||||
| 28307389 | 28307389 | PRJNA421571_P_NODE_50866_length_385_cov_1.131410_g48318_i0 | PRJNA421571 | 50866 | 385 | 1.13141 | 4.3559285 | Candidatus Sulfotelmatobacter sp. | 2771375 | Bacteria | Bacteria | 44.3 | 0.0485 | NR | HEX4784998.1 | 2771375 | g48318 | i0 | 38.6 | 0.342857142857143 | 44 | 27 | 34.3 | 0 | 242 | 111 | 491 | 534 | HEX4784998.1 carbon starvation CstA family protein [Candidatus Sulfotelmatobacter sp.] | diamond | 132 | 44.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Candidatus Korobacteraceae | Candidatus Sulfotelmatobacter | Candidatus Sulfotelmatobacter sp. | ||
| 28955671 | 28955671 | PRJNA421571_P_NODE_74408_length_291_cov_1.013761_g71859_i0 | PRJNA421571 | 74408 | 291 | 1.013761 | 2.95004451 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 167 | 1.69e-49 | NR | MBM3793404.1 | 1978231 | g71859 | i0 | 83.3 | 6.92783505154639 | 96 | 16 | 99 | 0 | 2 | 289 | 34 | 129 | MBM3793404.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 2016 | 168 | 0.994047619047619 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 29128539 | 29128539 | PRJNA421571_P_NODE_24909_length_682_cov_3.054187_g22450_i0 | PRJNA421571 | 24909 | 682 | 3.054187 | 20.82955534 | Terriglobia bacterium | 2081523 | Bacteria | Bacteria | 60.5 | 3.46e-7 | NR | MBZ5639833.1 | 2081523 | g22450 | i0 | 61 | 1.16129032258065 | 41 | 16 | 18 | 0 | 559 | 681 | 88 | 128 | MBZ5639833.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP [Terriglobia bacterium] | diamond | 792 | 60.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobia bacterium | |||||
| 29475287 | 29475287 | PRJNA421571_P_NODE_108390_length_200_cov_4.330709_g105841_i0 | PRJNA421571 | 108390 | 200 | 4.330709 | 8.661418 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 75.1 | 5.38e-14 | NR | MBP6823791.1 | 1978231 | g105841 | i0 | 56.1 | 1.95 | 66 | 29 | 99 | 0 | 3 | 200 | 68 | 133 | MBP6823791.1 isopenicillin N synthase family oxygenase [Acidobacteriota bacterium] | diamond | 390 | 75.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 29555145 | 29555145 | PRJNA421571_P_NODE_79970_length_277_cov_1.446078_g77421_i0 | PRJNA421571 | 79970 | 277 | 1.446078 | 4.00563606 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 115 | 1.56e-29 | NR | HTY82967.1 | 1964179 | g77421 | i0 | 67.1 | 19.4187725631769 | 82 | 27 | 88.8 | 0 | 31 | 276 | 3 | 84 | HTY82967.1 zinc-dependent alcohol dehydrogenase [Silvibacterium sp.] | diamond | 5379 | 116 | 0.991379310344828 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Silvibacterium | Silvibacterium sp. | ||
| 29633045 | 29633045 | PRJNA421571_P_NODE_102490_length_244_cov_0.900585_g99941_i0 | PRJNA421571 | 102490 | 244 | 0.900585 | 2.1974274 | Terriglobia bacterium | 2081523 | Bacteria | Bacteria | 56.2 | 5.59e-7 | NR | MFQ5695483.1 | 2081523 | g99941 | i0 | 41.3 | 1.80737704918033 | 80 | 39 | 98.4 | 3 | 243 | 4 | 194 | 265 | MFQ5695483.1 diacylglycerol/lipid kinase family protein [Terriglobia bacterium] | diamond | 441 | 56.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobia bacterium | |||||
| 29759641 | 29759641 | PRJNA421571_P_NODE_97751_length_247_cov_0.885057_g95202_i0 | PRJNA421571 | 97751 | 247 | 0.885057 | 2.18609079 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 113 | 2.54e-30 | NR | MDQ7008654.1 | 1978231 | g95202 | i0 | 80.6 | 0.874493927125506 | 72 | 14 | 87.4 | 0 | 14 | 229 | 31 | 102 | MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 216 | 113 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 30170324 | 30170324 | PRJNA421571_P_NODE_94832_length_249_cov_0.875000_g92283_i0 | PRJNA421571 | 94832 | 249 | 0.875 | 2.17875 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 85.5 | 3.35e-17 | NR | MDQ3171159.1 | 1978231 | g92283 | i0 | 55.1 | 7.54216867469879 | 78 | 34 | 94 | 1 | 247 | 14 | 85 | 161 | MDQ3171159.1 bifunctional metallophosphatase/5'-nucleotidase [Acidobacteriota bacterium] | diamond | 1878 | 85.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31055392 | 31055392 | PRJNA421571_P_NODE_26595_length_649_cov_3.366319_g24106_i0 | PRJNA421571 | 26595 | 649 | 3.366319 | 21.84741031 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 236 | 2.62e-75 | NR | MEM7351519.1 | 1978231 | g24106 | i0 | 72.3 | 1.46995377503852 | 159 | 44 | 73.5 | 0 | 630 | 154 | 21 | 179 | MEM7351519.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 954 | 236 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31134546 | 31134546 | PRJNA421571_P_NODE_101575_length_244_cov_1.467836_g99026_i0 | PRJNA421571 | 101575 | 244 | 1.467836 | 3.58151984 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 123 | 4.89e-31 | NR | MDQ2776657.1 | 1978231 | g99026 | i0 | 72.8 | 19.9180327868852 | 81 | 22 | 99.6 | 0 | 243 | 1 | 192 | 272 | MDQ2776657.1 aldehyde dehydrogenase family protein [Acidobacteriota bacterium] | diamond | 4860 | 124 | 0.991935483870968 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31877192 | 31877192 | PRJNA421571_P_NODE_98977_length_246_cov_0.890173_g96428_i0 | PRJNA421571 | 98977 | 246 | 0.890173 | 2.18982558 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 61.2 | 1.1e-9 | NR | MEO8074530.1 | 1978231 | g96428 | i0 | 63.3 | 2.18292682926829 | 79 | 28 | 95.1 | 1 | 241 | 8 | 31 | 109 | MEO8074530.1 VCBS repeat-containing protein [Acidobacteriota bacterium] | diamond | 537 | 61.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32098779 | 32098779 | PRJNA421571_P_NODE_94058_length_250_cov_0.870056_g91509_i0 | PRJNA421571 | 94058 | 250 | 0.870056 | 2.17514 | Sulfidibacter corallicola | 2818388 | Bacteria | Bacteria | 60.8 | 1.36e-8 | NR | WP_237382010.1 | 2818388 | g91509 | i0 | 54.3 | 0.552 | 46 | 19 | 55.2 | 1 | 45 | 182 | 263 | 306 | WP_237382010.1 SMP-30/gluconolactonase/LRE family protein [Sulfidibacter corallicola] | diamond | 138 | 60.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Acanthopleuribacterales | Acanthopleuribacteraceae | Sulfidibacter | Sulfidibacter corallicola | ||
| 32147077 | 32147077 | PRJNA421571_P_NODE_84178_length_267_cov_1.587629_g81629_i0 | PRJNA421571 | 84178 | 267 | 1.587629 | 4.23896943 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 129 | 1.33e-35 | NR | MEM7351519.1 | 1978231 | g81629 | i0 | 70.5 | 3.93258426966292 | 88 | 24 | 98.9 | 1 | 266 | 3 | 72 | 157 | MEM7351519.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 1050 | 129 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32257340 | 32257340 | PRJNA421571_P_NODE_104678_length_242_cov_0.911243_g102129_i0 | PRJNA421571 | 104678 | 242 | 0.911243 | 2.20520806 | Bryobacteraceae bacterium | 2212468 | Bacteria | Bacteria | 59.3 | 5.27e-8 | NR | HYL75751.1 | 2212468 | g102129 | i0 | 37.8 | 1.92148760330579 | 82 | 46 | 97.9 | 2 | 6 | 242 | 268 | 347 | HYL75751.1 family 20 glycosylhydrolase [Bryobacteraceae bacterium] | diamond | 465 | 59.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Bryobacterales | Bryobacteraceae | Bryobacteraceae bacterium | |||
| 32841697 | 32841697 | PRJNA421571_P_NODE_107500_length_236_cov_2.343558_g104951_i0 | PRJNA421571 | 107500 | 236 | 2.343558 | 5.53079688 | Bacteria | 2 | Bacteria | Bacteria | 46.6 | 6.27e-4 | NR | MBA3916600.1 | 2282142 | g104951 | i0 | 44.4 | 6.86440677966102 | 45 | 19 | 49.6 | 1 | 64 | 180 | 86 | 130 | MBA3916600.1 VOC family protein [Terriglobales bacterium] | diamond | 1620 | 47 | 0.991489361702128 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Terriglobales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;