RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA421571", tax_kingdom = "Orthornavirae" and tax_phylum = "Negarnaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 8 ✖

tax_kingdom 1

  • Orthornavirae · 8 ✖

bioproject 1

  • PRJNA421571 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2361552 2361552 PRJNA421571_P_NODE_70142_length_303_cov_1.469565_g67593_i0 PRJNA421571 70142 303 1.469565 4.45278195 Paramyxoviridae 11158 Viruses Viruses 555 1.7599999999999995e-153   NTclustered gi|2721617856|gb|PP711545.1| 251774 g67593 i0 99.67 68.3795379537954 303 1 100 0 1 303 10815 10513 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 20719 555 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
3636759 3636759 PRJNA421571_P_NODE_4603_length_1677_cov_4.379676_g3871_i0 PRJNA421571 4603 1677 4.379676 73.44716652 Orthorubulavirus 2560195 Viruses Viruses 3092 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g3871 i0 99.94 97.6869409660107 1677 1 100 0 1 1677 4485 6161 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 163821 3092 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
4913957 4913957 PRJNA421571_P_NODE_504_length_3044_cov_3.789633_g395_i0 PRJNA421571 504 3044 3.789633 115.35642852 Orthorubulavirus 2560195 Viruses Viruses 3949 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g395 i0 99.494 77.8298291721419 2172 10 100 1 873 3044 2206 36 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 236914 3949 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
6189266 6189266 PRJNA421571_P_NODE_8145_length_1326_cov_6.664006_g6940_i0 PRJNA421571 8145 1326 6.664006 88.36471956 Paramyxoviridae 11158 Viruses Viruses 2427 0   NTclustered gi|2721617856|gb|PP711545.1| 251774 g6940 i0 99.698 69.0399698340875 1326 4 100 0 1 1326 3382 2057 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 91547 2438 0.995488105004102 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
6189273 6189273 PRJNA421571_P_NODE_82385_length_271_cov_1.555556_g79836_i0 PRJNA421571 82385 271 1.555556 4.21555676 Orthorubulavirus 2560195 Viruses Viruses 501 2.05e-137   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g79836 i0 100 69.3173431734317 271 0 100 0 1 271 11431 11161 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 18785 501 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
18937346 18937346 PRJNA421571_P_NODE_50695_length_386_cov_0.980831_g48147_i0 PRJNA421571 50695 386 0.980831 3.78600766 Orthorubulavirus 2560195 Viruses Viruses 713 0   NTclustered gi|2449300967|gb|ON241249.1| 2560580 g48147 i0 100 63.9145077720207 386 0 100 0 1 386 15087 14702 Mammalian orthorubulavirus 5 isolate ATCC HTB-55 batch no 70037771, complete genome blastn 24671 713 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
20212273 20212273 PRJNA421571_P_NODE_66556_length_315_cov_1.590909_g64007_i0 PRJNA421571 66556 315 1.590909 5.01136335 Paramyxoviridae 11158 Viruses Viruses 582 8.459999999999998e-162   NTclustered gi|2721617856|gb|PP711545.1| 251774 g64007 i0 100 82.5619047619048 315 0 100 0 1 315 5548 5862 Porcine parainfluenza virus isolate PPIV-DX-Gansu-2020, partial genome blastn 26007 582 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Rubulavirus Porcine parainfluenza virus
26600515 26600515 PRJNA421571_P_NODE_60641_length_337_cov_1.166667_g58092_i0 PRJNA421571 60641 337 1.166667 3.93166779 brine shrimp arlivirus 5 2900380 Viruses Viruses 137 2.73e-39   NR UNI74092.1 2900380 g58092 i0 69.1 0.863501483679525 97 30 86.4 0 335 45 24 120 UNI74092.1 MAG: hypothetical protein [brine shrimp arlivirus 5] diamond 291 137 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Artemvirus Artemvirus bsafivalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;