RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA421571", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA421571 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18937514 18937514 PRJNA421571_P_NODE_67175_length_313_cov_1.283333_g64626_i0 PRJNA421571 67175 313 1.283333 4.01683229 Archaea 2157 Archaea Archaea 94.7 1.6e-20   NR HLE55307.1 1906666 g64626 i0 53.1 3.67092651757189 96 40 92 1 2 289 63 153 HLE55307.1 calcium/proton exchanger [Thermoplasmata archaeon] diamond 1149 95.5 0.991623036649215 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
32067081 32067081 PRJNA421571_P_NODE_94038_length_250_cov_0.870056_g91489_i0 PRJNA421571 94038 250 0.870056 2.17514 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 47.8 4.85e-4   NR MDP7328634.1 2670411 g91489 i0 65.1 1.56 43 15 51.6 0 250 122 4 46 MDP7328634.1 50S ribosomal protein L32e [Candidatus Thalassarchaeaceae archaeon] diamond 390 47.8 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;