RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where bioproject = "PRJNA421571", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 21 ✖

tax_kingdom 1

  • Metazoa · 21 ✖

tax_clade 1

bioproject 1

  • PRJNA421571 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
423654 423654 PRJNA421571_P_NODE_64141_length_324_cov_1.167331_g61592_i0 PRJNA421571 64141 324 1.167331 3.78215244 Asterias rubens 7604 Echinodermata other_Eukaryota 121 8.229999999999999e-23   NTclustered gi|1834267010|ref|XM_033772568.1| 7604 g61592 i0 88.119 3.0679012345679 101 12 31 0 86 186 402 502 PREDICTED: Asterias rubens dynein light chain LC6, flagellar outer arm (LOC117290977), mRNA blastn 994 121 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
4250480 4250480 PRJNA421571_P_NODE_56584_length_354_cov_1.580071_g54035_i0 PRJNA421571 56584 354 1.580071 5.59345134 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 67 3.99e-10   NR XP_030851423.1 7668 g54035 i0 34.9 3.08474576271186 109 67 89 1 319 5 401 509 XP_030851423.1 glucosidase 2 subunit beta [Strongylocentrotus purpuratus] diamond 1092 67 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
5527602 5527602 PRJNA421571_P_NODE_74845_length_289_cov_2.893519_g72296_i0 PRJNA421571 74845 289 2.893519 8.36226991 Diadema antillarum 105358 Echinodermata other_Eukaryota 58.4 5.75e-4   NTclustered gi|2919467476|ref|XM_071643602.1| 105358 g72296 i0 97.143 0.411764705882353 35 0 12 1 132 165 3809 3843 PREDICTED: Diadema antillarum prostaglandin reductase 2-like (LOC139732756), mRNA blastn 119 58.4 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
8075176 8075176 PRJNA421571_P_NODE_102767_length_243_cov_2.352941_g100218_i0 PRJNA421571 102767 243 2.352941 5.71764663 Echinodermata 7586 Echinodermata other_Eukaryota 124 1.51e-33   NR XP_033640423.1 7604 g100218 i0 75 13.8271604938272 80 20 98.8 0 2 241 23 102 XP_033640423.1 60S ribosomal protein L19-like [Asterias rubens] diamond 3360 124 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
18274735 18274735 PRJNA421571_P_NODE_44535_length_427_cov_2.231638_g41987_i0 PRJNA421571 44535 427 2.231638 9.52909426 Lytechinus pictus 7653 Echinodermata other_Eukaryota 54.7 0.011   NTclustered gi|2707361744|ref|XM_054910354.2| 7653 g41987 i0 100 0.0679156908665105 29 0 7 0 304 332 506 478 PREDICTED: Lytechinus pictus histone-lysine N-methyltransferase NSD2-like (LOC129273332), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
19549237 19549237 PRJNA421571_P_NODE_53916_length_368_cov_1.277966_g51367_i0 PRJNA421571 53916 368 1.277966 4.70291488 Patiria miniata 46514 Echinodermata other_Eukaryota 112 9.38e-27   NR XP_038072890.1 46514 g51367 i0 49.6 2.0054347826087 123 53 99.5 2 368 3 91 205 XP_038072890.1 calcium/calmodulin-dependent protein kinase type IV-like [Patiria miniata] diamond 738 112 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
23374492 23374492 PRJNA421571_P_NODE_21499_length_758_cov_3.480292_g19145_i0 PRJNA421571 21499 758 3.480292 26.38061336 Lytechinus pictus 7653 Echinodermata other_Eukaryota 129 2.41e-30   NR XP_063953926.1 7653 g19145 i0 38.7 2.12137203166227 181 104 71.6 1 1 543 420 593 XP_063953926.1 uncharacterized protein LOC135153732 [Lytechinus pictus] diamond 1608 129 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
24649541 24649541 PRJNA421571_P_NODE_49120_length_396_cov_1.191950_g46572_i0 PRJNA421571 49120 396 1.19195 4.720122 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 164 2.62e-45   NR XP_063966105.1 7653 g46572 i0 63.9 4.03787878787879 133 43 98.5 3 2 391 97 227 XP_063966105.1 large ribosomal subunit protein uL18-like [Lytechinus pictus] diamond 1599 165 0.993939393939394 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
26839317 26839317 PRJNA421571_P_NODE_99461_length_246_cov_0.890173_g96912_i0 PRJNA421571 99461 246 0.890173 2.18982558 Opisthokonta 33154 Echinodermata other_Eukaryota 112 1.0400000000000002e-27   NR XP_071502009.1 105358 g96912 i0 74.7 7.30487804878049 75 19 91.5 0 226 2 27 101 XP_071502009.1 malate dehydrogenase, mitochondrial-like [Diadema antillarum] diamond 1797 113 0.991150442477876 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
30233603 30233603 PRJNA421571_P_NODE_50012_length_390_cov_1.164038_g47464_i0 PRJNA421571 50012 390 1.164038 4.5397482 Patiria miniata 46514 Echinodermata other_Eukaryota 63.5 1.09e-8   NR XP_038053600.1 46514 g47464 i0 37.8 0.692307692307692 90 48 67.7 2 18 281 4876 4959 XP_038053600.1 MAM and LDL-receptor class A domain-containing protein 1-like [Patiria miniata] diamond 270 63.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30644208 30644208 PRJNA421571_P_NODE_56073_length_357_cov_1.024648_g53524_i0 PRJNA421571 56073 357 1.024648 3.65799336 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 44.7 0.028   NR KAJ8032438.1 206669 g53524 i0 32.8 1.09243697478992 67 43 56.3 1 356 156 776 840 KAJ8032438.1 RNA-directed DNA polymerase from mobile element jockey [Holothuria leucospilota] diamond 390 44.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
30707506 30707506 PRJNA421571_P_NODE_50534_length_387_cov_0.914013_g47986_i0 PRJNA421571 50534 387 0.914013 3.53723031 Diadema antillarum 105358 Echinodermata other_Eukaryota 72.8 5.77e-12   NR XP_071506436.1 105358 g47986 i0 47.4 1.82945736434109 78 41 60.5 0 287 54 473 550 XP_071506436.1 disks large homolog 1-like [Diadema antillarum] diamond 708 72.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
30707538 30707538 PRJNA421571_P_NODE_92754_length_251_cov_0.865169_g90205_i0 PRJNA421571 92754 251 0.865169 2.17157419 Patiria miniata 46514 Echinodermata other_Eukaryota 48.1 5.29e-4   NR XP_038077192.1 46514 g90205 i0 62.5 0.382470119521912 32 12 38.2 0 250 155 1169 1200 XP_038077192.1 fibropellin-1-like [Patiria miniata] diamond 96 48.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
30977033 30977033 PRJNA421571_P_NODE_93354_length_250_cov_0.870056_g90805_i0 PRJNA421571 93354 250 0.870056 2.17514 Metazoa 33208 Echinodermata other_Eukaryota 88.6 2.83e-18   NR XP_041457071.1 7654 g90805 i0 48.8 8.7 82 41 98.4 1 3 248 319 399 XP_041457071.1 putative phospholipase B-like 2 [Lytechinus variegatus] diamond 2175 89 0.995505617977528 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
31118059 31118059 PRJNA421571_P_NODE_86275_length_262_cov_2.222222_g83726_i0 PRJNA421571 86275 262 2.222222 5.82222164 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 58.2 6.02e-8   NR KAJ8046785.1 206669 g83726 i0 49.1 1.85496183206107 57 29 65.3 0 255 85 131 187 KAJ8046785.1 EKC/KEOPS complex subunit Tprkb [Holothuria leucospilota] diamond 486 58.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
31640783 31640783 PRJNA421571_P_NODE_93516_length_250_cov_0.870056_g90967_i0 PRJNA421571 93516 250 0.870056 2.17514 Echinodermata 7586 Echinodermata other_Eukaryota 66.6 1.52e-10   NR XP_041469074.1 7654 g90967 i0 60.8 3.252 51 20 61.2 0 2 154 322 372 XP_041469074.1 carboxypeptidase A1-like isoform X2 [Lytechinus variegatus] diamond 813 67 0.994029850746269 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
32147078 32147078 PRJNA421571_P_NODE_87638_length_259_cov_3.645161_g85089_i0 PRJNA421571 87638 259 3.645161 9.44096699 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 107 3.96e-26   NR XP_038063470.1 46514 g85089 i0 65.9 16.2046332046332 82 28 95 0 2 247 48 129 XP_038063470.1 60S ribosomal protein L7a-like [Patiria miniata] diamond 4197 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
32273795 32273795 PRJNA421571_P_NODE_57938_length_348_cov_1.400000_g55389_i0 PRJNA421571 57938 348 1.4 4.872 Metazoa 33208 Echinodermata other_Eukaryota 132 2.7e-35   NR XP_071499074.1 105358 g55389 i0 56 11.0086206896552 116 50 99.1 1 2 346 109 224 XP_071499074.1 persulfide dioxygenase ETHE1, mitochondrial-like [Diadema antillarum] diamond 3831 133 0.992481203007519 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32542037 32542037 PRJNA421571_P_NODE_83119_length_269_cov_2.719388_g80570_i0 PRJNA421571 83119 269 2.719388 7.31515372 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 133 2.1e-37   NR XP_030830056.1 7668 g80570 i0 91.4 1.77323420074349 70 6 78.1 0 58 267 1 70 XP_030830056.1 ADP-ribosylation factor-like [Strongylocentrotus purpuratus] diamond 477 133 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
32825338 32825338 PRJNA421571_P_NODE_97980_length_247_cov_0.885057_g95431_i0 PRJNA421571 97980 247 0.885057 2.18609079 Diadema antillarum 105358 Echinodermata other_Eukaryota 65.5 3.94e-10   NR XP_071503728.1 105358 g95431 i0 41.8 18.8866396761134 79 43 96 1 240 4 730 805 XP_071503728.1 protein transport protein Sec24C-like [Diadema antillarum] diamond 4665 65.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
32888091 32888091 PRJNA421571_P_NODE_77320_length_283_cov_1.976190_g74771_i0 PRJNA421571 77320 283 1.97619 5.5926177 Patiria miniata 46514 Echinodermata other_Eukaryota 56.2 7.99e-7   NR XP_038063470.1 46514 g74771 i0 42.9 0.667844522968198 63 35 65.7 1 277 92 198 260 XP_038063470.1 60S ribosomal protein L7a-like [Patiria miniata] diamond 189 56.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;