RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA421571", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA421571 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4251209 4251209 PRJNA421571_P_NODE_85124_length_265_cov_1.500000_g82575_i0 PRJNA421571 85124 265 1.5 3.975 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 73.1 1.86e-8   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g82575 i0 79.279 0.528301886792453 111 17 42 4 42 152 9430026 9429922 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 140 73.1 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
32573626 32573626 PRJNA421571_P_NODE_103219_length_243_cov_0.905882_g100670_i0 PRJNA421571 103219 243 0.905882 2.20129326 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 43.5 0.0196   NR MFN8607611.1 3107663 g100670 i0 35.2 1.08641975308642 88 45 93.8 3 1 228 83 170 MFN8607611.1 TMEM43 family protein [Vulcanimicrobiota bacterium] diamond 264 43.5 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;