RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA421571", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA421571 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
423020 423020 PRJNA421571_P_NODE_41641_length_451_cov_2.275132_g39093_i0 PRJNA421571 41641 451 2.275132 10.26084532 Bacteria 2 Bacteria Bacteria 181 1.8499999999999996e-55   NR HLP77548.1 2053589 g39093 i0 74.5 17.5410199556541 110 27 73.2 1 3 332 51 159 HLP77548.1 glycosidase [Candidatus Paceibacterota bacterium] diamond 7911 181 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27707954 27707954 PRJNA421571_P_NODE_98444_length_247_cov_0.885057_g95895_i0 PRJNA421571 98444 247 0.885057 2.18609079 Minisyncoccota bacterium 2053589 Bacteria Bacteria 59.3 4.96e-8   NR HXK31341.1 2053589 g95895 i0 42.9 0.935222672064777 77 44 93.5 0 240 10 77 153 HXK31341.1 GTPase [Candidatus Paceibacterota bacterium] diamond 231 59.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30707528 30707528 PRJNA421571_P_NODE_81514_length_273_cov_1.540000_g78965_i0 PRJNA421571 81514 273 1.54 4.2042 Minisyncoccota bacterium 2053589 Bacteria Bacteria 43.5 0.0286   NR MFA5987375.1 2053589 g78965 i0 47.9 0.527472527472527 48 23 50.5 1 23 160 299 346 MFA5987375.1 LamG domain-containing protein [Candidatus Paceibacterota bacterium] diamond 144 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31055420 31055420 PRJNA421571_P_NODE_82535_length_271_cov_1.222222_g79986_i0 PRJNA421571 82535 271 1.222222 3.31222162 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.1 0.00754   NR HXK31341.1 2053589 g79986 i0 45.5 0.487084870848708 44 24 48.7 0 47 178 98 141 HXK31341.1 GTPase [Candidatus Paceibacterota bacterium] diamond 132 45.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;