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contig_metadata

32 rows where bioproject = "PRJNA421571", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 32 ✖

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA421571 · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
424494 424494 PRJNA421571_P_NODE_98641_length_246_cov_1.780347_g96092_i0 PRJNA421571 98641 246 1.780347 4.37965362 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 176 1.26e-39   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g96092 i0 85.246 25.7235772357724 183 14 70 5 73 243 33191 33372 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 6328 176 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
2974127 2974127 PRJNA421571_P_NODE_56143_length_356_cov_1.823322_g53594_i0 PRJNA421571 56143 356 1.823322 6.49102632 Platyamoeba placida 3454475 Discosea other_Eukaryota 508 1.66e-139   NTclustered gi|33946348|gb|AY294153.1| 197527 g53594 i0 92.416 97.6797752808989 356 27 100 0 1 356 699 1054 Platyamoeba placida actin mRNA, partial cds blastn 34774 508 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
6801104 6801104 PRJNA421571_P_NODE_54846_length_363_cov_1.103448_g52297_i0 PRJNA421571 54846 363 1.103448 4.00551624 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 6.94e-49   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g52297 i0 82.906 8.09917355371901 234 36 64 3 121 352 232 1 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 2940 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9350682 9350682 PRJNA421571_P_NODE_29408_length_598_cov_8.057143_g26891_i0 PRJNA421571 29408 598 8.057143 48.18171514 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 534 4.8199999999999997e-147   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g26891 i0 84.507 61.8729096989967 568 58 100 23 1 548 606 49 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 37000 534 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
11901648 11901648 PRJNA421571_P_NODE_36290_length_505_cov_1.763889_g33747_i0 PRJNA421571 36290 505 1.763889 8.90763945 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 477 6.879999999999998e-130   NTclustered gi|470447963|ref|XM_004340066.1| 1257118 g33747 i0 86.301 85.6752475247525 438 60 87 0 12 449 1281 844 Acanthamoeba castellanii str. Neff ATP synthase, putative (ACA1_367940), partial mRNA blastn 43266 477 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13176219 13176219 PRJNA421571_P_NODE_25651_length_667_cov_2.262626_g23176_i0 PRJNA421571 25651 667 2.262626 15.09171542 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 118 2.4400000000000003e-27   NR XP_004341325.1 1257118 g23176 i0 61.8 1.70464767616192 89 34 40 0 627 361 307 395 XP_004341325.1 ribosomal protein L3, putative [Acanthamoeba castellanii str. Neff] diamond 1137 118 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13177325 13177325 PRJNA421571_P_NODE_62511_length_330_cov_1.198444_g59962_i0 PRJNA421571 62511 330 1.198444 3.9548652 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 160 1.5699999999999996e-43   NR XP_004334383.1 1257118 g59962 i0 73.6 20.5545454545455 106 28 96.4 0 2 319 206 311 XP_004334383.1 heat shock protein ssa1, putative [Acanthamoeba castellanii str. Neff] diamond 6783 160 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14451521 14451521 PRJNA421571_P_NODE_30072_length_588_cov_4.607767_g27550_i0 PRJNA421571 30072 588 4.607767 27.09366996 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 283 1.89e-71   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g27550 i0 84.859 20.6343537414966 284 39 48 4 90 371 21 302 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 12133 283 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16999746 16999746 PRJNA421571_P_NODE_22714_length_730_cov_2.971081_g20314_i0 PRJNA421571 22714 730 2.971081 21.6888913 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 411 1.0500000000000001e-109   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g20314 i0 83.153 36.5986301369863 463 65 62 12 265 720 32267 32723 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 26717 411 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
17000404 17000404 PRJNA421571_P_NODE_42834_length_441_cov_1.573370_g40286_i0 PRJNA421571 42834 441 1.57337 6.9385617 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 193 2.41e-44   NTclustered gi|470508804|ref|XM_004349582.1| 1257118 g40286 i0 76.44 22.5442176870748 382 74 85 13 1 377 658 1028 Acanthamoeba castellanii str. Neff calreticulin, putative (ACA1_142350), partial mRNA blastn 9942 193 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17000980 17000980 PRJNA421571_P_NODE_63614_length_326_cov_1.193676_g61065_i0 PRJNA421571 63614 326 1.193676 3.89138376 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 176 2.25e-51   NR XP_004332929.1 1257118 g61065 i0 74.8 12.8006134969325 107 27 98.5 0 3 323 98 204 XP_004332929.1 extracellular response kinase, putative [Acanthamoeba castellanii str. Neff] diamond 4173 176 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18273736 18273736 PRJNA421571_P_NODE_14795_length_967_cov_2.130872_g12884_i0 PRJNA421571 14795 967 2.130872 20.60553224 Paramoeba branchiphila 308475 Discosea other_Eukaryota 917 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g12884 i0 86.538 68.8200620475698 832 110 86 2 126 956 1202 372 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 66549 917 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
20826086 20826086 PRJNA421571_P_NODE_91917_length_251_cov_0.865169_g89368_i0 PRJNA421571 91917 251 0.865169 2.17157419 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 132 2.84e-26   NTclustered gi|470417341|ref|XM_004336934.1| 1257118 g89368 i0 85.156 0.50996015936255 128 19 51 0 110 237 1581 1454 Acanthamoeba castellanii str. Neff ATPase, AAA domain containing protein (ACA1_011280), partial mRNA blastn 128 132 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22099785 22099785 PRJNA421571_P_NODE_50638_length_386_cov_1.476038_g48090_i0 PRJNA421571 50638 386 1.476038 5.69750668 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 172 4.37e-50   NR XP_004356622.1 1257118 g48090 i0 75.4 0.886010362694301 114 16 88.6 1 1 342 214 315 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 342 172 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24650560 24650560 PRJNA421571_P_NODE_87460_length_260_cov_1.331551_g84911_i0 PRJNA421571 87460 260 1.331551 3.4620326 Paravannella minima 1443144 Discosea other_Eukaryota 108 4.99e-19   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g84911 i0 94.286 3.02307692307692 70 4 27 0 37 106 2789 2858 Paravannella minima mitochondrion, complete genome blastn 786 108 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
27201851 27201851 PRJNA421571_P_NODE_19782_length_803_cov_3.473973_g17521_i0 PRJNA421571 19782 803 3.473973 27.89600319 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.7 3.1e-17   NR XP_004349605.1 1257118 g17521 i0 33.1 0.496886674968867 133 81 48.6 2 758 369 4 131 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 399 86.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27707908 27707908 PRJNA421571_P_NODE_102964_length_243_cov_1.470588_g100415_i0 PRJNA421571 102964 243 1.470588 3.57352884 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 1.7599999999999998e-31   NR XP_004341068.1 1257118 g100415 i0 71.3 8.82716049382716 80 23 98.8 0 3 242 57 136 XP_004341068.1 polyadenylate-binding protein family protein [Acanthamoeba castellanii str. Neff] diamond 2145 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27770805 27770805 PRJNA421571_P_NODE_106464_length_241_cov_0.916667_g103915_i0 PRJNA421571 106464 241 0.916667 2.20916747 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.2 3.34e-12   NR XP_004336224.1 1257118 g103915 i0 45.7 1.00829875518672 81 42 98.3 1 2 238 222 302 XP_004336224.1 dynamin family protein [Acanthamoeba castellanii str. Neff] diamond 243 71.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28071285 28071285 PRJNA421571_P_NODE_98285_length_247_cov_0.885057_g95736_i0 PRJNA421571 98285 247 0.885057 2.18609079 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 1.88e-27   NR P53490.1 5755 g95736 i0 87.9 7.16599190283401 58 6 70.4 1 196 23 371 427 P53490.1 RecName: Full=Actin-related protein 3; AltName: Full=Actin-like protein 3 [Acanthamoeba castellanii] diamond 1770 113 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28338988 28338988 PRJNA421571_P_NODE_47386_length_407_cov_1.838323_g44838_i0 PRJNA421571 47386 407 1.838323 7.48197461 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 56.2 4.02e-6   NR XP_004336317.1 1257118 g44838 i0 45.9 0.44963144963145 61 33 45 0 4 186 407 467 XP_004336317.1 ubiquinone biosynthesis protein AarF family protein, putative [Acanthamoeba castellanii str. Neff] diamond 183 56.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28465375 28465375 PRJNA421571_P_NODE_61106_length_335_cov_1.484733_g58557_i0 PRJNA421571 61106 335 1.484733 4.97385555 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 96.7 4.809999999999999e-23   NR XP_004333102.1 1257118 g58557 i0 66.7 1.8089552238806 66 22 59.1 0 3 200 66 131 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 606 96.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29601576 29601576 PRJNA421571_P_NODE_105670_length_242_cov_0.875740_g103121_i0 PRJNA421571 105670 242 0.87574 2.1192908 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 83.6 1.5e-17   NR XP_004334651.1 1257118 g103121 i0 46.8 0.979338842975207 79 42 97.9 0 242 6 22 100 XP_004334651.1 Polyprotein [Acanthamoeba castellanii str. Neff] diamond 237 83.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30170320 30170320 PRJNA421571_P_NODE_88752_length_257_cov_1.445652_g86203_i0 PRJNA421571 88752 257 1.445652 3.71532564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 49.3 2.22e-4   NR XP_004367563.1 1257118 g86203 i0 34.4 0.747081712062257 64 42 74.7 0 256 65 1119 1182 XP_004367563.1 uncharacterized protein ACA1_252520 [Acanthamoeba castellanii str. Neff] diamond 192 49.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30865475 30865475 PRJNA421571_P_NODE_68874_length_307_cov_1.820513_g66325_i0 PRJNA421571 68874 307 1.820513 5.58897491 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 156 4.6699999999999985e-43   NR XP_004334520.1 1257118 g66325 i0 65.7 0.996742671009772 102 35 99.7 0 307 2 315 416 XP_004334520.1 CMF receptor CMFR1, putative [Acanthamoeba castellanii str. Neff] diamond 306 156 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30992043 30992043 PRJNA421571_P_NODE_58994_length_343_cov_2.422222_g56445_i0 PRJNA421571 58994 343 2.422222 8.30822146 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 147 9.38e-41   NR XP_004356622.1 1257118 g56445 i0 65.4 0.935860058309038 107 36 92.7 1 338 21 1 107 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 321 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31687478 31687478 PRJNA421571_P_NODE_83357_length_269_cov_1.387755_g80808_i0 PRJNA421571 83357 269 1.387755 3.73306095 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 76.6 5.91e-14   NR XP_004340742.1 1257118 g80808 i0 44.9 0.992565055762082 89 42 91.4 2 15 260 134 222 XP_004340742.1 PA domain containing protein [Acanthamoeba castellanii str. Neff] diamond 267 76.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31719185 31719185 PRJNA421571_P_NODE_92457_length_251_cov_0.865169_g89908_i0 PRJNA421571 92457 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.3 8.14e-11   NR XP_004349605.1 1257118 g89908 i0 40.7 0.968127490039841 81 45 96.8 2 1 243 4 81 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 243 64.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31925479 31925479 PRJNA421571_P_NODE_76737_length_285_cov_1.254717_g74188_i0 PRJNA421571 76737 285 1.254717 3.57594345 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 92 1.74e-20   NR XP_004353201.1 1257118 g74188 i0 55.4 1.95789473684211 92 35 96.8 1 8 283 25 110 XP_004353201.1 exosome component 3, putative [Acanthamoeba castellanii str. Neff] diamond 558 92 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32098744 32098744 PRJNA421571_P_NODE_101298_length_245_cov_0.877907_g98749_i0 PRJNA421571 101298 245 0.877907 2.15087215 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.8 7.16e-7   NR XP_004358047.1 1257118 g98749 i0 35 2.88979591836735 80 51 98 1 1 240 123 201 XP_004358047.1 SET domain containing protein, partial [Acanthamoeba castellanii str. Neff] diamond 708 55.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32320663 32320663 PRJNA421571_P_NODE_88299_length_258_cov_1.491892_g85750_i0 PRJNA421571 88299 258 1.491892 3.84908136 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.1 3.38e-17   NR XP_004368304.1 1257118 g85750 i0 51.3 1.84883720930233 76 37 88.4 0 29 256 191 266 XP_004368304.1 aminotransferase, class I/II superfamily protein [Acanthamoeba castellanii str. Neff] diamond 477 85.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32352212 32352212 PRJNA421571_P_NODE_97299_length_247_cov_1.752874_g94750_i0 PRJNA421571 97299 247 1.752874 4.32959878 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 70.9 2.47e-13   NR XP_004333787.1 1257118 g94750 i0 52.5 0.740890688259109 61 28 72.9 1 63 242 26 86 XP_004333787.1 Cofilin/tropomyosin-type actin-binding protein [Acanthamoeba castellanii str. Neff] diamond 183 70.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32478755 32478755 PRJNA421571_P_NODE_94939_length_249_cov_0.875000_g92390_i0 PRJNA421571 94939 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.2 7.42e-13   NR XP_004337199.1 1257118 g92390 i0 51.7 0.72289156626506 60 29 72.3 0 3 182 391 450 XP_004337199.1 Alpha/beta hydrolase fold protein [Acanthamoeba castellanii str. Neff] diamond 180 73.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;