RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA416866" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA416866 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27170172 27170172 PRJNA416866_P_NODE_3822_length_339_cov_1.715827_g3679_i0 PRJNA416866 3822 339 1.715827 5.81665353 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 68.6 4.32e-11   NR TEB19254.1 2494336 g3679 i0 62.3 0.469026548672566 53 20 46.9 0 12 170 211 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 159 68.6 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
30029139 30029139 PRJNA416866_P_NODE_5771_length_272_cov_1.549763_g5627_i0 PRJNA416866 5771 272 1.549763 4.21535536 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 99 1.12e-24   NR KAF4695161.1 32597 g5627 i0 69.2 10.1580882352941 65 20 71.7 0 65 259 2 66 KAF4695161.1 serine/threonine protein kinase Ran1, partial [Perkinsus olseni] diamond 2763 100 0.99 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
30960334 30960334 PRJNA416866_P_NODE_1234_length_637_cov_4.486111_g1096_i0 PRJNA416866 1234 637 4.486111 28.57652707 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 271 1.54e-89   NR XP_002778466.1 423536 g1096 i0 69.5 0.894819466248038 190 57 89 1 36 602 1 190 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 570 271 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
31529473 31529473 PRJNA416866_P_NODE_5436_length_281_cov_0.922727_g5292_i0 PRJNA416866 5436 281 0.922727 2.59286287 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 50.4 1.13e-4   NR KAF4653424.1 32597 g5292 i0 40.6 3.29893238434164 69 32 73.7 1 72 278 112 171 KAF4653424.1 hypothetical protein FOL46_009212 [Perkinsus olseni] diamond 927 50.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;