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contig_metadata

15 rows where bioproject = "PRJNA416866", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 15 ✖

tax_phylum 1

  • Myxococcota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA416866 · 15 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26648854 26648854 PRJNA416866_P_NODE_4421_length_313_cov_1.523810_g4278_i0 PRJNA416866 4421 313 1.52381 4.7695253 Haliangium 162027 Bacteria Bacteria 105 1.07e-25   NR HEX7837634.1 2212474 g4278 i0 53.5 1.88817891373802 99 33 86.3 2 271 2 56 150 HEX7837634.1 hypothetical protein [Kofleriaceae bacterium] diamond 591 105 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
27724402 27724402 PRJNA416866_P_NODE_7224_length_241_cov_1.355556_g7080_i0 PRJNA416866 7224 241 1.355556 3.26688996 Myxococcia 32015 Bacteria Bacteria 47.8 6.06e-4   NR MBI4951596.1 2026763 g7080 i0 55.3 1.96680497925311 47 18 56 2 209 75 544 589 MBI4951596.1 DUF11 domain-containing protein [Myxococcales bacterium] diamond 474 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28560037 28560037 PRJNA416866_P_NODE_8247_length_225_cov_0.981707_g8103_i0 PRJNA416866 8247 225 0.981707 2.20884075 Kofleriaceae bacterium 2212474 Bacteria Bacteria 43.5 0.00823   NR HTR52097.1 2212474 g8103 i0 61.3 0.413333333333333 31 12 41.3 0 103 11 39 69 HTR52097.1 hypothetical protein [Kofleriaceae bacterium] diamond 93 43.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
28812183 28812183 PRJNA416866_P_NODE_848_length_799_cov_1.623306_g721_i0 PRJNA416866 848 799 1.623306 12.97021494 Myxococcales bacterium 2026763 Bacteria Bacteria 57 3.87e-5   NR MBK6461975.1 2026763 g721 i0 31.6 1.61827284105131 171 77 60.5 8 240 722 614 754 MBK6461975.1 DUF11 domain-containing protein [Myxococcales bacterium] diamond 1293 57 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28906979 28906979 PRJNA416866_P_NODE_6108_length_264_cov_0.935961_g5964_i0 PRJNA416866 6108 264 0.935961 2.47093704 Polyangiales bacterium 3034171 Bacteria Bacteria 44.3 0.0137   NR HET8936208.1 3034171 g5964 i0 50 0.613636363636364 54 25 61.4 1 263 102 198 249 HET8936208.1 phenylalanine--tRNA ligase subunit beta [Polyangiales bacterium] diamond 162 44.3 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales     Polyangiales bacterium
29380811 29380811 PRJNA416866_P_NODE_10149_length_207_cov_0.876712_g10005_i0 PRJNA416866 10149 207 0.876712 1.81479384 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 110 7.13e-29   NR MCL4235509.1 2026735 g10005 i0 75.8 1.91304347826087 66 16 95.7 0 207 10 86 151 MCL4235509.1 fatty acid desaturase [Deltaproteobacteria bacterium] diamond 396 110 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29633020 29633020 PRJNA416866_P_NODE_970_length_735_cov_1.743323_g835_i0 PRJNA416866 970 735 1.743323 12.81342405 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 55.5 8.5e-5   NR MBK7064594.1 2026735 g835 i0 37.2 1.01224489795918 113 44 41.6 7 18 323 15 111 MBK7064594.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 744 55.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29980825 29980825 PRJNA416866_P_NODE_10531_length_205_cov_1.722222_g10387_i0 PRJNA416866 10531 205 1.722222 3.5305551 Polyangia bacterium 3058050 Bacteria Bacteria 47.8 3.17e-4   NR HEX7499693.1 3058050 g10387 i0 45.8 0.702439024390244 48 23 65.9 1 180 46 183 230 HEX7499693.1 hypothetical protein [Polyangia bacterium] diamond 144 47.8 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
30201726 30201726 PRJNA416866_P_NODE_6412_length_257_cov_1.306122_g6268_i0 PRJNA416866 6412 257 1.306122 3.35673354 Kofleriaceae bacterium 2212474 Bacteria Bacteria 42.7 0.0433   NR HEY0484351.1 2212474 g6268 i0 42.1 0.665369649805447 57 33 66.5 0 38 208 34 90 HEY0484351.1 cyclic nucleotide-binding domain-containing protein [Kofleriaceae bacterium] diamond 171 42.7 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30675740 30675740 PRJNA416866_P_NODE_10473_length_206_cov_0.882759_g10329_i0 PRJNA416866 10473 206 0.882759 1.81848354 Myxococcota bacterium 2818507 Bacteria Bacteria 42 0.0435   NR MDI7268090.1 2818507 g10329 i0 42.6 0.786407766990291 54 27 72.8 2 39 188 415 468 MDI7268090.1 putative metal-binding motif-containing protein [Myxococcota bacterium] diamond 162 42 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30739018 30739018 PRJNA416866_P_NODE_2194_length_463_cov_2.049751_g2051_i0 PRJNA416866 2194 463 2.049751 9.49034713 Polyangiaceae bacterium 2268199 Bacteria Bacteria 48.5 0.00344   NR MFO0667317.1 2268199 g2051 i0 31 1.10799136069114 171 92 98.5 7 2 457 556 719 MFO0667317.1 dickkopf-related protein [Polyangiaceae bacterium] diamond 513 48.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
31624161 31624161 PRJNA416866_P_NODE_8096_length_227_cov_1.542169_g7952_i0 PRJNA416866 8096 227 1.542169 3.50072363 Polyangiaceae bacterium 2268199 Bacteria Bacteria 79.7 1.62e-15   NR HEY3816582.1 2268199 g7952 i0 64.9 4.62555066079295 57 20 75.3 0 227 57 281 337 HEY3816582.1 class 1 fructose-bisphosphatase [Polyangiaceae bacterium] diamond 1050 79.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32257296 32257296 PRJNA416866_P_NODE_5018_length_292_cov_1.939394_g4874_i0 PRJNA416866 5018 292 1.939394 5.66303048 Polyangiaceae bacterium 2268199 Bacteria Bacteria 94.7 1.87e-20   NR HVJ19388.1 2268199 g4874 i0 44.2 1.06849315068493 104 51 99.7 2 291 1 80 183 HVJ19388.1 hypothetical protein [Polyangiaceae bacterium] diamond 312 94.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32288975 32288975 PRJNA416866_P_NODE_9639_length_209_cov_0.864865_g9495_i0 PRJNA416866 9639 209 0.864865 1.80756785 Sandaracinaceae bacterium LLY-WYZ-13_1 3034333 Bacteria Bacteria 46.6 0.00104   NR HJL20389.1 3034333 g9495 i0 47.9 0.688995215311005 48 18 68.9 1 16 159 244 284 HJL20389.1 hypothetical protein [Sandaracinaceae bacterium LLY-WYZ-13_1] diamond 144 46.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae   Sandaracinaceae bacterium LLY-WYZ-13_1
32778639 32778639 PRJNA416866_P_NODE_3040_length_387_cov_1.180982_g2897_i0 PRJNA416866 3040 387 1.180982 4.57040034 Pseudomonadati 3379134 Bacteria Bacteria 48.1 0.00214   NR MCA9493101.1 2026763 g2897 i0 33.8 1.25581395348837 77 48 59.7 1 254 24 192 265 MCA9493101.1 HAMP domain-containing histidine kinase [Myxococcales bacterium] diamond 486 48.5 0.991752577319588 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;