RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA416866" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJNA416866 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26775873 26775873 PRJNA416866_P_NODE_10001_length_207_cov_1.315068_g9857_i0 PRJNA416866 10001 207 1.315068 2.72219076 root 1 Root_unresolved Root_unresolved 96.3 1.63e-21   NR MEI6795318.1 1906667 g9857 i0 72.5 9.98550724637681 69 19 100 0 1 207 284 352 MEI6795318.1 MFS transporter [Methanomassiliicoccales archaeon] diamond 2067 96.7 0.995863495346432 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales     Methanomassiliicoccales archaeon
31134533 31134533 PRJNA416866_P_NODE_5415_length_281_cov_1.850000_g5271_i0 PRJNA416866 5415 281 1.85 5.1985 root 1 Root_unresolved Root_unresolved 126 3.4e-33   NR MBU38126.1 2026739 g5271 i0 64.4 8.51957295373665 101 24 95 1 2 268 208 308 MBU38126.1 pyridoxal 5'-phosphate synthase lyase subunit PdxS [Methanobacteriota archaeon] diamond 2394 126 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;