RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA416866", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA416866 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9347722 9347722 PRJNA416866_P_NODE_2008_length_484_cov_1.664303_g1866_i0 PRJNA416866 2008 484 1.664303 8.05522652 Fungi 4751 Fungi Fungi 111 2.36e-27   NR KAI9225112.1 64508 g1866 i0 77.5 4.95247933884298 80 18 49.6 0 8 247 100 179 KAI9225112.1 ribosomal protein L19e-domain-containing protein [Blastocladiella britannica] diamond 2397 111 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
16997061 16997061 PRJNA416866_P_NODE_1894_length_498_cov_2.013730_g1752_i0 PRJNA416866 1894 498 2.01373 10.0283754 Paraphysoderma sedebokerense 1500003 Fungi Fungi 194 2.12e-58   NR KAI9144860.1 1500003 g1752 i0 63.6 10.855421686747 162 54 97.6 2 495 10 74 230 KAI9144860.1 hypothetical protein BKA69DRAFT_1143625 [Paraphysoderma sedebokerense] diamond 5406 194 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
27360217 27360217 PRJNA416866_P_NODE_9643_length_209_cov_0.864865_g9499_i0 PRJNA416866 9643 209 0.864865 1.80756785 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 64.3 5.81e-10   NR KAI9152443.1 1313167 g9499 i0 49.2 7.00478468899522 63 31 89 1 190 5 168 230 KAI9152443.1 hypothetical protein H9P43_009234 [Blastocladiella emersonii ATCC 22665] diamond 1464 64.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;