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contig_metadata

20 rows where bioproject = "PRJNA416866", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 20 ✖

tax_clade 1

  • Sar · 20 ✖

bioproject 1

  • PRJNA416866 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
419640 419640 PRJNA416866_P_NODE_9841_length_208_cov_0.870748_g9697_i0 PRJNA416866 9841 208 0.870748 1.81115584 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 150 6.28e-32   NTclustered gi|471233821|ref|XM_004039041.1| 5932 g9697 i0 80.829 17.9038461538462 193 35 92 2 14 205 852 1043 Ichthyophthirius multifiliis hypothetical protein (IMG5_034130) mRNA, complete cds blastn 3724 150 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
1694456 1694456 PRJNA416866_P_NODE_2322_length_449_cov_5.332474_g2179_i0 PRJNA416866 2322 449 5.332474 23.94280826 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 813 0   NTclustered gi|2651357788|gb|PP174303.1| 41631 g2179 i0 99.332 68.6926503340757 449 3 100 0 1 449 3541 3989 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 30843 813 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
3634604 3634604 PRJNA416866_P_NODE_4983_length_293_cov_2.336207_g4839_i0 PRJNA416866 4983 293 2.336207 6.84508651 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 265 3.21e-66   NTclustered gi|194245783|gb|EU828456.1| 5888 g4839 i0 84.477 56.9249146757679 277 33 93 8 22 293 3305 3034 Paramecium tetraurelia large subunit ribosomal RNA gene, complete sequence blastn 16679 265 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
5523413 5523413 PRJNA416866_P_NODE_7805_length_231_cov_2.488235_g7661_i0 PRJNA416866 7805 231 2.488235 5.74782285 Colpoda sp. 41631 SAR_Eukaryotes SAR_Eukaryotes 411 2.9599999999999995e-110   NTclustered gi|2651357788|gb|PP174303.1| 41631 g7661 i0 98.701 100.251082251082 231 3 100 0 1 231 3052 2822 Colpoda sp. isolate CIL1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23158 411 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda sp.
7461718 7461718 PRJNA416866_P_NODE_8346_length_223_cov_1.969136_g8202_i0 PRJNA416866 8346 223 1.969136 4.39117328 Uronematidae 35105 SAR_Eukaryotes SAR_Eukaryotes 412 7.88e-111   NTclustered gi|406609852|dbj|AB749127.1| 187299 g8202 i0 100 100.340807174888 223 0 100 0 1 223 1511 1289 Uncultured ciliate gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.5-78 blastn 22376 412 1 Eukaryota Sar   Ciliophora         uncultured ciliate
8736636 8736636 PRJNA416866_P_NODE_4247_length_320_cov_1.320463_g4104_i0 PRJNA416866 4247 320 1.320463 4.2254816 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 150 4.81e-44   NR CDW82785.1 5949 g4104 i0 71.7 13.875 106 30 99.4 0 319 2 4 109 CDW82785.1 40s ribosomal protein [Stylonychia lemnae] diamond 4440 151 0.993377483443709 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
12562472 12562472 PRJNA416866_P_NODE_3170_length_377_cov_1.920886_g3027_i0 PRJNA416866 3170 377 1.920886 7.24174022 Oligohymenophorea 6020 SAR_Eukaryotes SAR_Eukaryotes 630 3.629999999999999e-176   NTclustered gi|2354193480|gb|OP896969.1| 2006707 g3027 i0 96.817 90.763925729443 377 12 100 0 1 377 830 1206 Philasterida sp. strain tDaCF9_52 large subunit ribosomal RNA gene, partial sequence blastn 34218 634 0.993690851735016 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida     Philasterida sp.
14448538 14448538 PRJNA416866_P_NODE_3532_length_355_cov_2.289116_g3389_i0 PRJNA416866 3532 355 2.289116 8.1263618 Cyclidium sp. MMP-2020a 2704628 SAR_Eukaryotes SAR_Eukaryotes 634 2.6199999999999992e-177   NTclustered gi|2009899914|gb|MW785065.1| 2704628 g3389 i0 98.873 67.701408450704207 355 4 100 0 1 355 833 479 Cyclidium sp. MMP-2020a isolate SM20191018 large subunit ribosomal RNA gene, partial sequence blastn 24034 634 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium sp. MMP-2020a
18271276 18271276 PRJNA416866_P_NODE_12275_length_179_cov_5.220339_g12131_i0 PRJNA416866 12275 179 5.220339 9.34440681 Prodiscocephalus orientalis 2652905 SAR_Eukaryotes SAR_Eukaryotes 84.2 5.38e-12   NTclustered gi|2328859132|gb|OP828533.1| 2652905 g12131 i0 77.931 33.9217877094972 145 24 79 6 31 171 1663 1523 Prodiscocephalus orientalis isolate LCY2018050403 large subunit ribosomal RNA gene, partial sequence blastn 6072 84.2 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Discocephalidae Prodiscocephalus Prodiscocephalus orientalis
18271299 18271299 PRJNA416866_P_NODE_5995_length_266_cov_1.560976_g5851_i0 PRJNA416866 5995 266 1.560976 4.15219616 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 425 1.24e-114   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5851 i0 95.489 15.6052631578947 266 12 100 0 1 266 304 39 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 4151 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
18935228 18935228 PRJNA416866_P_NODE_6615_length_253_cov_1.578125_g6471_i0 PRJNA416866 6615 253 1.578125 3.99265625 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 438 1.5099999999999996e-118   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6471 i0 98.016 74.102766798419 252 5 99 0 1 252 1646 1897 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 18748 438 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19545484 19545484 PRJNA416866_P_NODE_4436_length_313_cov_1.257937_g4293_i0 PRJNA416866 4436 313 1.257937 3.93734281 Caryotricha minuta 1004043 SAR_Eukaryotes SAR_Eukaryotes 202 2.7499999999999996e-47   NTclustered gi|759083508|gb|KM222125.1| 1004043 g4293 i0 85.204 23.6198083067093 196 29 63 0 114 309 1283 1088 Caryotricha minuta voucher LWW07112802 large subunit ribosomal RNA gene, partial sequence blastn 7393 202 1 Eukaryota Sar   Ciliophora Spirotrichea Kiitrichida Kiitrichidae Caryotricha Caryotricha minuta
21485469 21485469 PRJNA416866_P_NODE_4777_length_301_cov_1.041667_g4633_i0 PRJNA416866 4777 301 1.041667 3.13541767 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 551 2.2699999999999992e-152   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g4633 i0 99.668 99.8272425249169 301 1 100 0 1 301 1535 1235 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 30048 551 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24035531 24035531 PRJNA416866_P_NODE_8859_length_216_cov_1.535484_g8715_i0 PRJNA416866 8859 216 1.535484 3.31664544 Colpodidae 5978 SAR_Eukaryotes SAR_Eukaryotes 399 5.909999999999999e-107   NTclustered gi|2067012198|gb|MZ557838.1| 5980 g8715 i0 100 100.111111111111 216 0 100 0 1 216 336 121 Colpoda inflata isolate ZL20210414 small subunit ribosomal RNA gene, partial sequence blastn 21624 399 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda inflata
25309882 25309882 PRJNA416866_P_NODE_10260_length_206_cov_1.800000_g10116_i0 PRJNA416866 10260 206 1.8 3.708 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 377 2.62e-100   NTclustered gi|2067012198|gb|MZ557838.1| 5980 g10116 i0 100 99.0291262135922 204 0 99 0 3 206 1067 864 Colpoda inflata isolate ZL20210414 small subunit ribosomal RNA gene, partial sequence blastn 20400 377 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda inflata
26617383 26617383 PRJNA416866_P_NODE_9581_length_209_cov_0.864865_g9437_i0 PRJNA416866 9581 209 0.864865 1.80756785 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 59.7 2.55e-8   NR CAI2363781.1 5936 g9437 i0 44.6 1.60765550239234 56 30 80.4 1 3 170 2183 2237 CAI2363781.1 unnamed protein product [Moneuplotes crassus] diamond 336 59.7 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
26839291 26839291 PRJNA416866_P_NODE_1181_length_652_cov_2.583756_g1044_i0 PRJNA416866 1181 652 2.583756 16.84608912 Spirotrichea 33829 SAR_Eukaryotes SAR_Eukaryotes 55.5 4.72e-5   NR CAI2365810.1 5936 g1044 i0 41.9 0.579754601226994 62 35 28.5 1 435 620 62 122 CAI2365810.1 unnamed protein product [Moneuplotes crassus] diamond 378 55.5 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
26980604 26980604 PRJNA416866_P_NODE_1522_length_564_cov_2.147117_g1382_i0 PRJNA416866 1522 564 2.147117 12.10973988 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 213 2.93e-65   NR OMJ65538.1 5963 g1382 i0 61.8 2.03191489361702 191 57 98.4 5 562 8 52 232 OMJ65538.1 hypothetical protein SteCoe_38039 [Stentor coeruleus] diamond 1146 213 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
28465305 28465305 PRJNA416866_P_NODE_11326_length_203_cov_0.901408_g11182_i0 PRJNA416866 11326 203 0.901408 1.82985824 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 53.5 2.48e-6   NR KRX05637.1 266149 g11182 i0 65.7 0.517241379310345 35 12 51.7 0 13 117 204 238 KRX05637.1 hypothetical protein PPERSA_09777 [Pseudocohnilembus persalinus] diamond 105 53.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31466249 31466249 PRJNA416866_P_NODE_4796_length_300_cov_1.606695_g4652_i0 PRJNA416866 4796 300 1.606695 4.820085 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 91.3 1.28e-20   NR CAG9318382.1 1481888 g4652 i0 73.9 0.46 46 12 46 0 1 138 90 135 CAG9318382.1 unnamed protein product [Blepharisma stoltei] diamond 138 91.3 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;