contig_metadata
25 rows where bioproject = "PRJNA416866" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4246684 | 4246684 | PRJNA416866_P_NODE_10484_length_206_cov_0.882759_g10340_i0 | PRJNA416866 | 10484 | 206 | 0.882759 | 1.81848354 | Planctomycetia | 203683 | Bacteria | Bacteria | 105 | 1.34e-26 | NR | MEE3180495.1 | 2026780 | g10340 | i0 | 80.3 | 6.56796116504854 | 61 | 12 | 88.8 | 0 | 22 | 204 | 19 | 79 | MEE3180495.1 adenosylhomocysteinase [Planctomycetota bacterium] | diamond | 1353 | 106 | 0.990566037735849 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 4246701 | 4246701 | PRJNA416866_P_NODE_264_length_1354_cov_6.601701_g205_i0 | PRJNA416866 | 264 | 1354 | 6.601701 | 89.38703154 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 289 | 1.86e-90 | NR | RYD71398.1 | 2026800 | g205 | i0 | 44.8 | 0.786558345642541 | 355 | 183 | 77.3 | 6 | 1261 | 215 | 14 | 361 | RYD71398.1 MAG: hypothetical protein EOP84_24945, partial [Verrucomicrobiaceae bacterium] | diamond | 1065 | 289 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 6797408 | 6797408 | PRJNA416866_P_NODE_11426_length_202_cov_1.361702_g11282_i0 | PRJNA416866 | 11426 | 202 | 1.361702 | 2.75063804 | Aureliella sp. | 2795609 | Bacteria | Bacteria | 115 | 5.13e-28 | NR | MFN3191721.1 | 2795609 | g11282 | i0 | 81.5 | 1.93069306930693 | 65 | 12 | 96.5 | 0 | 197 | 3 | 499 | 563 | MFN3191721.1 NADP-dependent isocitrate dehydrogenase [Aureliella sp.] | diamond | 390 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulaceae | Aureliella | Aureliella sp. | |
| 15111479 | 15111479 | PRJNA416866_P_NODE_252_length_1378_cov_6.574032_g196_i0 | PRJNA416866 | 252 | 1378 | 6.574032 | 90.59016096 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 434 | 1.6399999999999995e-147 | NR | RYD65414.1 | 2026800 | g196 | i0 | 76.3 | 0.61611030478955 | 283 | 65 | 61.6 | 1 | 318 | 1166 | 56 | 336 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 849 | 434 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 16997082 | 16997082 | PRJNA416866_P_NODE_6094_length_264_cov_1.261084_g5950_i0 | PRJNA416866 | 6094 | 264 | 1.261084 | 3.32926176 | Sedimentisphaerales bacterium | 2813034 | Bacteria | Bacteria | 69.4 | 2.39e-7 | NTclustered | gi|2621705864|emb|OY763926.1| | 2813034 | g5950 | i0 | 95.349 | 4.83333333333333 | 43 | 2 | 16 | 0 | 7 | 49 | 2551960 | 2552002 | MAG: Sedimentisphaerales bacterium isolate 7f5c64f7-1a0d-4936-834e-775057159072 genome assembly, chromosome: 1 | blastn | 1276 | 69.4 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Sedimentisphaerales | Sedimentisphaerales bacterium | |||
| 22760718 | 22760718 | PRJNA416866_P_NODE_3398_length_363_cov_1.576159_g3255_i0 | PRJNA416866 | 3398 | 363 | 1.576159 | 5.72145717 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 166 | 9.569999999999999e-48 | NR | WP_347441213.1 | 2109375 | g3255 | i0 | 67.2 | 12.3884297520661 | 119 | 39 | 98.3 | 0 | 361 | 5 | 169 | 287 | WP_347441213.1 NADPH-dependent aldehyde reductase Ahr [Rubritalea sp.] | diamond | 4497 | 167 | 0.994011976047904 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Rubritaleaceae | Rubritalea | Rubritalea sp. | |
| 26854338 | 26854338 | PRJNA416866_P_NODE_6701_length_251_cov_1.473684_g6557_i0 | PRJNA416866 | 6701 | 251 | 1.473684 | 3.69894684 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 94.7 | 2.06e-20 | NR | RYD77759.1 | 2026800 | g6557 | i0 | 60.2 | 0.99203187250996006 | 83 | 33 | 99.2 | 0 | 3 | 251 | 162 | 244 | RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] | diamond | 249 | 94.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27123491 | 27123491 | PRJNA416866_P_NODE_3442_length_361_cov_1.440000_g3299_i0 | PRJNA416866 | 3442 | 361 | 1.44 | 5.1984 | PVC group | 1783257 | Bacteria | Bacteria | 63.2 | 3.17e-9 | NR | MCK4859712.1 | 2035772 | g3299 | i0 | 62.5 | 1.66204986149584 | 40 | 15 | 33.2 | 0 | 325 | 206 | 2 | 41 | MCK4859712.1 adenylate kinase [Candidatus Omnitrophota bacterium] | diamond | 600 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | Candidatus Omnitrophota | Candidatus Omnitrophota bacterium | |||||
| 27138372 | 27138372 | PRJNA416866_P_NODE_2862_length_400_cov_1.138643_g2719_i0 | PRJNA416866 | 2862 | 400 | 1.138643 | 4.554572 | Lentisphaeria bacterium | 2053569 | Bacteria | Bacteria | 50.8 | 4.83e-5 | NR | MBO5694326.1 | 2053569 | g2719 | i0 | 62.2 | 0.57 | 37 | 14 | 27.8 | 0 | 400 | 290 | 4 | 40 | MBO5694326.1 sel1 repeat family protein [Lentisphaeria bacterium] | diamond | 228 | 50.8 | 1 | Bacteria | PVC group | Pseudomonadati | Lentisphaerota | Lentisphaeria | Lentisphaeria bacterium | ||||
| 27170173 | 27170173 | PRJNA416866_P_NODE_4682_length_304_cov_1.950617_g4538_i0 | PRJNA416866 | 4682 | 304 | 1.950617 | 5.92987568 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 103 | 3.94e-24 | NR | RYD81270.1 | 2026800 | g4538 | i0 | 78.9 | 0.5625 | 57 | 12 | 56.3 | 0 | 132 | 302 | 179 | 235 | RYD81270.1 MAG: hypothetical protein EOP84_11265, partial [Verrucomicrobiaceae bacterium] | diamond | 171 | 103 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27581040 | 27581040 | PRJNA416866_P_NODE_9464_length_209_cov_0.864865_g9320_i0 | PRJNA416866 | 9464 | 209 | 0.864865 | 1.80756785 | Kiritimatiellia bacterium | 2212473 | Bacteria | Bacteria | 43.1 | 0.0175 | NR | MBR3921640.1 | 2212473 | g9320 | i0 | 41 | 1.67942583732057 | 39 | 22 | 56 | 1 | 200 | 84 | 231 | 268 | MBR3921640.1 beta-galactosidase [Kiritimatiellia bacterium] | diamond | 351 | 43.1 | 1 | Bacteria | PVC group | Pseudomonadati | Kiritimatiellota | Kiritimatiellia | Kiritimatiellia bacterium | ||||
| 27896734 | 27896734 | PRJNA416866_P_NODE_9605_length_209_cov_0.864865_g9461_i0 | PRJNA416866 | 9605 | 209 | 0.864865 | 1.80756785 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 50.1 | 6.22e-5 | NR | HEX5270779.1 | 2052164 | g9461 | i0 | 47.7 | 0.631578947368421 | 44 | 23 | 63.2 | 0 | 206 | 75 | 617 | 660 | HEX5270779.1 hypothetical protein [Gemmataceae bacterium] | diamond | 132 | 50.1 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 29254309 | 29254309 | PRJNA416866_P_NODE_5729_length_273_cov_1.547170_g5585_i0 | PRJNA416866 | 5729 | 273 | 1.54717 | 4.2237741 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 46.6 | 0.00123 | NR | MCX6904291.1 | 2026799 | g5585 | i0 | 44.1 | 0.648351648351648 | 59 | 33 | 64.8 | 0 | 94 | 270 | 53 | 111 | MCX6904291.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 177 | 46.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29349321 | 29349321 | PRJNA416866_P_NODE_10329_length_206_cov_0.882759_g10185_i0 | PRJNA416866 | 10329 | 206 | 0.882759 | 1.81848354 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 84.3 | 1.72e-17 | NR | MDB2614324.1 | 2047757 | g10185 | i0 | 55.2 | 0.975728155339806 | 67 | 30 | 97.6 | 0 | 206 | 6 | 167 | 233 | MDB2614324.1 FAD-binding oxidoreductase [Chlamydiales bacterium] | diamond | 201 | 84.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31276205 | 31276205 | PRJNA416866_P_NODE_7075_length_244_cov_1.398907_g6931_i0 | PRJNA416866 | 7075 | 244 | 1.398907 | 3.41333308 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 42 | 0.0455 | NR | MFM8642726.1 | 2052180 | g6931 | i0 | 45.2 | 1.0327868852459 | 42 | 23 | 51.6 | 0 | 126 | 1 | 78 | 119 | MFM8642726.1 hypothetical protein [Phycisphaerales bacterium] | diamond | 252 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 31339463 | 31339463 | PRJNA416866_P_NODE_10896_length_204_cov_0.895105_g10752_i0 | PRJNA416866 | 10896 | 204 | 0.895105 | 1.8260142 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 42 | 0.0399 | NR | MFM8415446.1 | 2026780 | g10752 | i0 | 43.1 | 0.75 | 51 | 23 | 70.6 | 2 | 157 | 14 | 185 | 232 | MFM8415446.1 hypothetical protein [Planctomycetota bacterium] | diamond | 153 | 42 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 31529471 | 31529471 | PRJNA416866_P_NODE_3736_length_344_cov_0.897527_g3593_i0 | PRJNA416866 | 3736 | 344 | 0.897527 | 3.08749288 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 78.2 | 1.96e-14 | NR | MDB2614324.1 | 2047757 | g3593 | i0 | 43.8 | 0.697674418604651 | 80 | 45 | 69.8 | 0 | 336 | 97 | 188 | 267 | MDB2614324.1 FAD-binding oxidoreductase [Chlamydiales bacterium] | diamond | 240 | 78.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31655664 | 31655664 | PRJNA416866_P_NODE_9897_length_208_cov_0.870748_g9753_i0 | PRJNA416866 | 9897 | 208 | 0.870748 | 1.81115584 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 91.7 | 1.02e-20 | NR | MBN2068425.1 | 2026772 | g9753 | i0 | 62.1 | 0.951923076923077 | 66 | 25 | 95.2 | 0 | 5 | 202 | 131 | 196 | MBN2068425.1 hypothetical protein [Opitutales bacterium] | diamond | 198 | 91.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 31782188 | 31782188 | PRJNA416866_P_NODE_5717_length_273_cov_2.971698_g5573_i0 | PRJNA416866 | 5717 | 273 | 2.971698 | 8.11273554 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 82 | 6.19e-18 | NR | WP_102713290.1 | 239935 | g5573 | i0 | 53.6 | 2.96703296703297 | 69 | 32 | 75.8 | 0 | 209 | 3 | 2 | 70 | WP_102713290.1 RNA recognition motif domain-containing protein [Akkermansia muciniphila] | diamond | 810 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 31877080 | 31877080 | PRJNA416866_P_NODE_11097_length_203_cov_1.802817_g10953_i0 | PRJNA416866 | 11097 | 203 | 1.802817 | 3.65971851 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 101 | 5.2599999999999997e-23 | NR | RYD77759.1 | 2026800 | g10953 | i0 | 77.6 | 0.990147783251232 | 67 | 15 | 99 | 0 | 1 | 201 | 478 | 544 | RYD77759.1 MAG: hypothetical protein EOP84_15150, partial [Verrucomicrobiaceae bacterium] | diamond | 201 | 101 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32098706 | 32098706 | PRJNA416866_P_NODE_5458_length_280_cov_1.168950_g5314_i0 | PRJNA416866 | 5458 | 280 | 1.16895 | 3.27306 | Chlamydiia bacterium | 2052156 | Bacteria | Bacteria | 43.5 | 0.0182 | NR | MBI3900844.1 | 2052156 | g5314 | i0 | 33.3 | 0.739285714285714 | 69 | 46 | 73.9 | 0 | 240 | 34 | 18 | 86 | MBI3900844.1 hypothetical protein [Chlamydiia bacterium] | diamond | 207 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiia bacterium | ||||
| 32257301 | 32257301 | PRJNA416866_P_NODE_7058_length_244_cov_1.890710_g6914_i0 | PRJNA416866 | 7058 | 244 | 1.89071 | 4.6133324 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 146 | 5.07e-43 | NR | RYD73503.1 | 2026800 | g6914 | i0 | 84 | 1.99180327868852 | 81 | 13 | 99.6 | 0 | 243 | 1 | 1 | 81 | RYD73503.1 MAG: fructose-bisphosphate aldolase class I, partial [Verrucomicrobiaceae bacterium] | diamond | 486 | 146 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32541967 | 32541967 | PRJNA416866_P_NODE_8979_length_214_cov_2.091503_g8835_i0 | PRJNA416866 | 8979 | 214 | 2.091503 | 4.47581642 | Candidatus Scalindua sp. | 2268189 | Bacteria | Bacteria | 49.7 | 6.15e-6 | NR | MCP4254449.1 | 2268189 | g8835 | i0 | 82.1 | 0.785046728971963 | 28 | 5 | 39.3 | 0 | 1 | 84 | 28 | 55 | MCP4254449.1 hypothetical protein [Candidatus Scalindua sp.] | diamond | 168 | 49.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Candidatus Brocadiia | Candidatus Brocadiales | Candidatus Scalinduaceae | Candidatus Scalindua | Candidatus Scalindua sp. | |
| 32747302 | 32747302 | PRJNA416866_P_NODE_11840_length_201_cov_0.914286_g11696_i0 | PRJNA416866 | 11840 | 201 | 0.914286 | 1.83771486 | Bacteria | 2 | Bacteria | Bacteria | 43.5 | 0.00763 | NR | MAE66251.1 | 2026777 | g11696 | i0 | 51.7 | 1.73134328358209 | 29 | 14 | 43.3 | 0 | 2 | 88 | 53 | 81 | MAE66251.1 cytidine deaminase [Phycisphaeraceae bacterium] | diamond | 348 | 43.9 | 0.990888382687927 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 32856636 | 32856636 | PRJNA416866_P_NODE_4820_length_299_cov_1.613445_g4676_i0 | PRJNA416866 | 4820 | 299 | 1.613445 | 4.82420055 | Parachlamydia sp. | 2052048 | Bacteria | Bacteria | 64.3 | 1.85e-9 | NR | MCE5316308.1 | 2052048 | g4676 | i0 | 38.9 | 0.903010033444816 | 90 | 55 | 90.3 | 0 | 5 | 274 | 469 | 558 | MCE5316308.1 ankyrin repeat domain-containing protein [Parachlamydia sp.] | diamond | 270 | 64.3 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Parachlamydia | Parachlamydia sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;