RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA416866", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_phylum 2

tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA416866 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27186841 27186841 PRJNA416866_P_NODE_11142_length_203_cov_1.352113_g10998_i0 PRJNA416866 11142 203 1.352113 2.74478939 root 1 Root_unresolved Root_unresolved 43.9 0.00854   NR KAJ3447856.1 1746091 g10998 i0 60.6 1.064039408867 33 13 48.8 0 3 101 365 397 KAJ3447856.1 mitogen-activated protein kinase [Anaeramoeba flamelloides] diamond 216 43.9 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31103137 31103137 PRJNA416866_P_NODE_4355_length_316_cov_1.074510_g4212_i0 PRJNA416866 4355 316 1.07451 3.3954516 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 101 6.1e-23   NR KAG9396111.1 201153 g4212 i0 43.3 2.94303797468354 104 58 98.7 1 314 3 259 361 KAG9396111.1 NAD-dependent epimerase/dehydratase [Carpediemonas membranifera] diamond 930 101 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
31276204 31276204 PRJNA416866_P_NODE_6755_length_250_cov_1.354497_g6611_i0 PRJNA416866 6755 250 1.354497 3.3862425 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 50.4 6.14e-5   NR XP_067734459.1 2049356 g6611 i0 43.1 0.864 72 36 86.4 2 31 246 22 88 XP_067734459.1 putative leucine-rich melanocyte differentiation-associated protein [Monocercomonoides exilis] diamond 216 50.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;