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contig_metadata

18 rows where bioproject = "PRJNA416866", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 18 ✖

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJNA416866 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3634586 3634586 PRJNA416866_P_NODE_10143_length_207_cov_0.876712_g9999_i0 PRJNA416866 10143 207 0.876712 1.81479384 root 1 Root_unresolved Root_unresolved 381 2.0299999999999995e-101   NTclustered gi|909719646|gb|KT185626.1| 5755 g9999 i0 100 57.6183574879227 206 0 99 0 2 207 3749 3954 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11927 381 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6797411 6797411 PRJNA416866_P_NODE_11886_length_201_cov_0.914286_g11742_i0 PRJNA416866 11886 201 0.914286 1.83771486 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 368 1.53e-97   NTclustered gi|470526273|ref|XM_004356675.1| 1257118 g11742 i0 100 59.18407960199 199 0 99 0 1 199 318 516 Acanthamoeba castellanii str. Neff ribosomal protein L19e, putative (ACA1_174910), partial mRNA blastn 11896 368 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9347710 9347710 PRJNA416866_P_NODE_10028_length_207_cov_0.876712_g9884_i0 PRJNA416866 10028 207 0.876712 1.81479384 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 377 2.63e-100   NTclustered gi|470450828|ref|XM_004340382.1| 1257118 g9884 i0 99.517 76.43961352657 207 1 100 0 1 207 943 737 Acanthamoeba castellanii str. Neff elongation factor 1alpha, somatic form, putative (ACA1_138040), partial mRNA blastn 15823 377 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10623513 10623513 PRJNA416866_P_NODE_11369_length_203_cov_0.901408_g11225_i0 PRJNA416866 11369 203 0.901408 1.82985824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 161 2.82e-35   NTclustered gi|470457305|ref|XM_004341077.1| 1257118 g11225 i0 93.578 0.812807881773399 109 6 81 1 96 203 296 404 Acanthamoeba castellanii str. Neff mitochondrial carnitineacylcarnitine carrier protein (ACA1_236290), partial mRNA blastn 165 161 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11898484 11898484 PRJNA416866_P_NODE_3990_length_331_cov_1.359259_g3847_i0 PRJNA416866 3990 331 1.359259 4.49914729 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 573 5.379999999999998e-159   NTclustered gi|300078498|gb|GU001160.1| 5755 g3847 i0 97.898 29.809667673716 333 3 100 3 1 331 5377 5707 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9867 573 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11898497 11898497 PRJNA416866_P_NODE_6510_length_255_cov_1.608247_g6366_i0 PRJNA416866 6510 255 1.608247 4.10102985 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 131 8.76e-37   NR XP_004341446.1 1257118 g6366 i0 89.3 67.0235294117647 75 8 88.2 0 254 30 80 154 XP_004341446.1 core histone h2a/h2b/h3/h4 superfamily protein [Acanthamoeba castellanii str. Neff] diamond 17091 131 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14448544 14448544 PRJNA416866_P_NODE_4612_length_306_cov_2.183673_g4468_i0 PRJNA416866 4612 306 2.183673 6.68203938 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 510 3.92e-140   NTclustered gi|300078498|gb|GU001160.1| 5755 g4468 i0 96.753 13.797385620915 308 6 100 4 1 306 6747 7052 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4222 510 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15722318 15722318 PRJNA416866_P_NODE_12093_length_194_cov_2.300752_g11949_i0 PRJNA416866 12093 194 2.300752 4.46345888 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 226 9.319999999999998e-55   NTclustered gi|470515123|ref|XM_004352829.1| 1257118 g11949 i0 100 0.804123711340206 122 0 63 0 73 194 439 318 Acanthamoeba castellanii str. Neff S25 ribosomal protein (ACA1_069370), partial mRNA blastn 156 226 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15722347 15722347 PRJNA416866_P_NODE_6493_length_255_cov_2.489691_g6349_i0 PRJNA416866 6493 255 2.489691 6.34871205 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 418 1.9799999999999998e-112   NTclustered gi|300078498|gb|GU001160.1| 5755 g6349 i0 96.471 25.9372549019608 255 5 100 2 1 255 7805 7555 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 6614 418 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18271308 18271308 PRJNA416866_P_NODE_7695_length_233_cov_1.215116_g7551_i0 PRJNA416866 7695 233 1.215116 2.83122028 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 424 3.8399999999999996e-114   NTclustered gi|470467737|ref|XM_004341780.1| 1257118 g7551 i0 99.569 74.8969957081545 232 1 99 0 2 233 645 414 Acanthamoeba castellanii str. Neff elongation factor 1-alpha, putative (ACA1_200430), partial mRNA blastn 17451 424 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22096082 22096082 PRJNA416866_P_NODE_2258_length_456_cov_1.777215_g2115_i0 PRJNA416866 2258 456 1.777215 8.1041004 Vexillifera expectata 1789827 Discosea other_Eukaryota 621 2.69e-173   NTclustered gi|1042160921|dbj|LC102267.1| 1789827 g2115 i0 91.228 99.8421052631579 456 40 100 0 1 456 221 676 Vexillifera expectata gene for actin, partial cds, strain: 4730_cl2 blastn 45528 621 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera expectata
24645995 24645995 PRJNA416866_P_NODE_10580_length_205_cov_0.888889_g10436_i0 PRJNA416866 10580 205 0.888889 1.82222245 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 303 4.48e-78   NTclustered gi|470416173|ref|XM_004336808.1| 1257118 g10436 i0 93.659 1 205 10 100 1 1 205 307 106 Acanthamoeba castellanii str. Neff HMGL family domain containing protein (ACA1_130190), partial mRNA blastn 205 303 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27170180 27170180 PRJNA416866_P_NODE_8162_length_226_cov_1.551515_g8018_i0 PRJNA416866 8162 226 1.551515 3.5064239 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.2 1.8e-8   NR XP_004347153.1 1257118 g8018 i0 39.2 3.82300884955752 74 42 94.2 2 224 12 1 74 XP_004347153.1 EF hand domain containing protein [Acanthamoeba castellanii str. Neff] diamond 864 58.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28875625 28875625 PRJNA416866_P_NODE_7388_length_238_cov_1.446328_g7244_i0 PRJNA416866 7388 238 1.446328 3.44226064 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.9 2.78e-19   NR XP_004337874.1 1257118 g7244 i0 63 1.61344537815126 73 21 89.5 3 22 234 1 69 XP_004337874.1 uncharacterized protein ACA1_187480 [Acanthamoeba castellanii str. Neff] diamond 384 85.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30423496 30423496 PRJNA416866_P_NODE_3333_length_366_cov_4.573770_g3190_i0 PRJNA416866 3333 366 4.57377 16.7399982 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 77.4 2.13e-15   NR XP_004338485.1 1257118 g3190 i0 42.1 0.778688524590164 95 54 77 1 297 16 32 126 XP_004338485.1 uncharacterized protein ACA1_034100 [Acanthamoeba castellanii str. Neff] diamond 285 77.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30707457 30707457 PRJNA416866_P_NODE_5934_length_268_cov_1.236715_g5790_i0 PRJNA416866 5934 268 1.236715 3.3143962 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 3.89e-28   NR XP_004348720.1 1257118 g5790 i0 66.3 0.895522388059702 80 27 89.6 0 13 252 49 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 240 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31339476 31339476 PRJNA416866_P_NODE_9516_length_209_cov_0.864865_g9372_i0 PRJNA416866 9516 209 0.864865 1.80756785 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.5 2.29e-8   NR XP_004339465.1 1257118 g9372 i0 44.9 0.990430622009569 69 31 99 1 209 3 50 111 XP_004339465.1 isochorismatase family superfamily protein [Acanthamoeba castellanii str. Neff] diamond 207 58.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32098705 32098705 PRJNA416866_P_NODE_4558_length_308_cov_2.072874_g4414_i0 PRJNA416866 4558 308 2.072874 6.38445192 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 100 7.6e-25   NR XP_004349605.1 1257118 g4414 i0 48 0.993506493506494 102 50 99.4 1 307 2 1 99 XP_004349605.1 uncharacterized protein ACA1_142080 [Acanthamoeba castellanii str. Neff] diamond 306 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;