RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA415856" and tax_phylum = "Thermoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA415856 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10623310 10623310 PRJNA415856_P_NODE_47749_length_163_cov_0.894737_g47488_i0 PRJNA415856 47749 163 0.894737 1.45842131 Methanomassiliicoccaceae archaeon DOK 1535962 Archaea Archaea 279 5.73e-71   NTclustered gi|1799215713|gb|CP047880.1| 1535962 g47488 i0 97.546 1 163 4 100 0 1 163 1513968 1514130 Methanomassiliicoccaceae archaeon DOK chromosome, complete genome blastn 163 279 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae   Methanomassiliicoccaceae archaeon DOK
31845490 31845490 PRJNA415856_P_NODE_53517_length_161_cov_0.892857_g53256_i0 PRJNA415856 53517 161 0.892857 1.43749977 Marine Group III euryarchaeote 2173149 Archaea Archaea 46.6 5.5e-5   NR HIG63595.1 2173149 g53256 i0 48.1 1.6583850931677 52 27 96.9 0 156 1 6 57 HIG63595.1 hypothetical protein [Marine Group III euryarchaeote] diamond 267 46.6 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Candidatus Thermoprofundales     Marine Group III euryarchaeote
32667663 32667663 PRJNA415856_P_NODE_17940_length_206_cov_0.866242_g17679_i0 PRJNA415856 17940 206 0.866242 1.78445852 Thermoplasmatota archaeon 2806419 Archaea Archaea 42.7 0.0219   NR HEX9710542.1 2806419 g17679 i0 39.4 0.961165048543689 66 39 94.7 1 8 202 136 201 HEX9710542.1 hypothetical protein [Thermoplasmatota archaeon] diamond 198 42.7 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;