RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA415856" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA415856 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5523144 5523144 PRJNA415856_P_NODE_44145_length_164_cov_0.886957_g43884_i0 PRJNA415856 44145 164 0.886957 1.45460948 Candidatus Phytoplasma australasiaticum 2754999 Bacteria Bacteria 70.5 3.57e-14   NR MDV3180607.1 2754999 g43884 i0 87.9 0.603658536585366 33 4 60.4 0 2 100 15 47 MDV3180607.1 hypothetical protein [Candidatus Phytoplasma australasiaticum] diamond 99 70.5 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae Candidatus Phytoplasma Candidatus Phytoplasma australasiaticum
31940347 31940347 PRJNA415856_P_NODE_46117_length_163_cov_0.894737_g45856_i0 PRJNA415856 46117 163 0.894737 1.45842131 Mollicutes bacterium 37628 Bacteria Bacteria 42 0.0233   NR HHT38468.1 37628 g45856 i0 37.5 0.883435582822086 48 30 88.3 0 149 6 271 318 HHT38468.1 YfhO family protein [Mollicutes bacterium] diamond 144 42 1 Bacteria   Bacillati Mycoplasmatota Mollicutes       Mollicutes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;