metadata: contig_metadata: 55 rows where bioproject = "PRJNA415856", tax_phylum = "Campylobacterota" and tax

55 rows where bioproject = "PRJNA415856", tax_phylum = "Campylobacterota" and tax_superkingdom = "Bacteria"

descending

Link	rowid ▼	query	bioproject	node	length	coverage	rel_abundance	taxname_lca	taxid_lca	taxoncategory	taxoncategorysimple	bits	evalue	analysis_used	target	taxid	gene	allele	pident	sumperc_cov	alnlen	mismatch	qcov	gapopen	qstart	qend	tstart	tend	target_title	analysis	sumalnlen	maxbits	bits_percmax	tax_superkingdom	tax_kingdom	tax_phylum	tax_class	tax_order	tax_family	tax_genus	tax_species
419255	419255	PRJNA415856_P_NODE_26301_length_181_cov_1.303030_g26040_i0	PRJNA415856	26301	181	1.30303	2.3584843	Campylobacter showae	204	Bacteria	Bacteria	302	1.3800000000000001e-77	NTclustered	gi\|1483583495\|emb\|LT631419.1\|	204	g26040	i0	96.685	11	181	6	100	0	1	181	212821	212641	Campylobacter showae genome assembly, chromosome: I	blastn	1991	302	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
1083540	1083540	PRJNA415856_P_NODE_44661_length_164_cov_0.886957_g44400_i0	PRJNA415856	44661	164	0.886957	1.45460948	Campylobacter	194	Bacteria	Bacteria	303	3.42e-78	NTclustered	gi\|2703220886\|gb\|CP148181.1\|	197	g44400	i0	100	100	164	0	100	0	1	164	509979	510142	Campylobacter jejuni strain Z1323CCJ0101 chromosome, complete genome	blastn	16400	303	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
2969939	2969939	PRJNA415856_P_NODE_21023_length_191_cov_1.922535_g20762_i0	PRJNA415856	21023	191	1.922535	3.67204185	Campylobacter sp. CCUG 57310	2517362	Bacteria	Bacteria	303	4.11e-78	NTclustered	gi\|1847337518\|gb\|CP053845.1\|	2517362	g20762	i0	97.727	229.837696335079	176	4	92	0	16	191	84737	84562	Campylobacter sp. CCUG 57310 chromosome, complete genome	blastn	43899	303	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter sp. CCUG 57310
4246298	4246298	PRJNA415856_P_NODE_22864_length_187_cov_1.666667_g22603_i0	PRJNA415856	22864	187	1.666667	3.11666729	Helicobacter canis	29419	Bacteria	Bacteria	346	6.56e-91	NTclustered	gi\|50957150\|gb\|AY596235.1\|	29419	g22603	i0	100	143.802139037433	187	0	100	0	1	187	1458	1272	Helicobacter canis strain ATCC 51402 23S ribosomal RNA gene, partial sequence	blastn	26891	346	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
4246381	4246381	PRJNA415856_P_NODE_33484_length_169_cov_1.375000_g33223_i0	PRJNA415856	33484	169	1.375	2.32375	Campylobacter showae	204	Bacteria	Bacteria	272	9.95e-69	NTclustered	gi\|1483583555\|emb\|LT631479.1\|	204	g33223	i0	95.858	28.4082840236686	169	6	100	1	1	169	553836	553669	Campylobacter showae strain B91_TPP genome assembly, chromosome: I	blastn	4801	272	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
4911463	4911463	PRJNA415856_P_NODE_28104_length_177_cov_2.414062_g27843_i0	PRJNA415856	28104	177	2.414062	4.27288974	Campylobacter	194	Bacteria	Bacteria	327	2.2199999999999996e-85	NTclustered	gi\|2703256232\|gb\|CP148214.1\|	197	g27843	i0	100	100	177	0	100	0	1	177	1453595	1453419	Campylobacter jejuni strain Z1323CCJ0059 chromosome, complete genome	blastn	17700	327	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
4911595	4911595	PRJNA415856_P_NODE_50824_length_161_cov_2.276786_g50563_i0	PRJNA415856	50824	161	2.276786	3.66562546	root	1	Root_unresolved	Root_unresolved	298	1.56e-76	NTclustered	gi\|1483583505\|emb\|LT631429.1\|	204	g50563	i0	100	104	161	0	100	0	1	161	33730	33570	Campylobacter showae genome assembly, plasmid: V	blastn	16744	298	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
6796884	6796884	PRJNA415856_P_NODE_1066_length_943_cov_5.202461_g913_i0	PRJNA415856	1066	943	5.202461	49.05920723	Helicobacter canis	29419	Bacteria	Bacteria	355	6.49e-93	NTclustered	gi\|1721134163\|emb\|LR698964.1\|	29419	g913	i0	79.839	0.525980911983033	496	92	52	6	286	777	244671	244180	Helicobacter canis isolate MGYG-HGUT-01463 genome assembly, chromosome: 1	blastn	496	355	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
6797107	6797107	PRJNA415856_P_NODE_37026_length_166_cov_2.247863_g36765_i0	PRJNA415856	37026	166	2.247863	3.73145258	Arcobacter suis	1278212	Bacteria	Bacteria	52.8	0.014	NTclustered	gi\|1474790806\|gb\|CP032100.1\|	663365	g36765	i0	100	0.168674698795181	28	0	17	0	93	120	1435517	1435490	Arcobacter suis CECT 7833 chromosome, complete genome	blastn	28	52.8	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Arcobacter	Arcobacter suis
6797261	6797261	PRJNA415856_P_NODE_6_length_6305_cov_7.217711_g5_i0	PRJNA415856	6	6305	7.217711	455.07667855	Helicobacter canis	29419	Bacteria	Bacteria	669	0	NTclustered	gi\|1721134163\|emb\|LR698964.1\|	29419	g5	i0	87.081	0.183822363203807	596	71	9	6	4575	5167	969782	969190	Helicobacter canis isolate MGYG-HGUT-01463 genome assembly, chromosome: 1	blastn	1159	669	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
7461407	7461407	PRJNA415856_P_NODE_30286_length_174_cov_1.392000_g30025_i0	PRJNA415856	30286	174	1.392	2.42208	Campylobacter	194	Bacteria	Bacteria	267	4.7999999999999993e-67	NTclustered	gi\|1483583506\|emb\|LT631430.1\|	204	g30025	i0	94.253	5.98275862068965	174	10	100	0	1	174	15468	15295	Campylobacter showae genome assembly, plasmid: VI	blastn	1041	268	0.996268656716418	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
7461480	7461480	PRJNA415856_P_NODE_40506_length_165_cov_0.879310_g40245_i0	PRJNA415856	40506	165	0.87931	1.4508615	Campylobacter	194	Bacteria	Bacteria	305	9.59e-79	NTclustered	gi\|1100599896\|gb\|CP017859.1\|	197	g40245	i0	100	100	165	0	100	0	1	165	825961	826125	Campylobacter jejuni strain YQ2210, complete genome	blastn	16500	305	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
8072608	8072608	PRJNA415856_P_NODE_31747_length_171_cov_2.418033_g31486_i0	PRJNA415856	31747	171	2.418033	4.13483643	Arcobacteraceae bacterium	2808971	Bacteria	Bacteria	117	5.01e-22	NTclustered	gi\|2621701254\|emb\|OY759974.1\|	2808971	g31486	i0	83.465	10.0701754385965	127	19	74	2	9	134	4930	5055	MAG: Arcobacteraceae bacterium isolate 2f960911-6b7a-430b-8fcb-36b605e4e712 genome assembly, chromosome: 1	blastn	1722	117	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae		Arcobacteraceae bacterium
9347552	9347552	PRJNA415856_P_NODE_51028_length_161_cov_1.821429_g50767_i0	PRJNA415856	51028	161	1.821429	2.93250069	Campylobacter showae	204	Bacteria	Bacteria	283	4.3599999999999995e-72	NTclustered	gi\|1483583529\|emb\|LT631453.1\|	204	g50767	i0	98.742	6.95652173913043	159	2	99	0	1	159	1553806	1553964	Campylobacter showae strain B91_SCBr genome assembly, chromosome: I	blastn	1120	283	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
12562242	12562242	PRJNA415856_P_NODE_43090_length_164_cov_0.886957_g42829_i0	PRJNA415856	43090	164	0.886957	1.45460948	root	1	Root_unresolved	Root_unresolved	303	3.42e-78	NTclustered	gi\|2423708788\|gb\|CP115181.1\|	195	g42829	i0	100	135.640243902439	164	0	100	0	1	164	596516	596353	Campylobacter coli strain 18JS15S chromosome, complete genome	blastn	22245	303	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter coli
13837039	13837039	PRJNA415856_P_NODE_49051_length_162_cov_0.902655_g48790_i0	PRJNA415856	49051	162	0.902655	1.4623011	Campylobacter	194	Bacteria	Bacteria	300	4.36e-77	NTclustered	gi\|2323232558\|gb\|CP109813.1\|	195	g48790	i0	100	100	162	0	100	0	1	162	1519173	1519334	Campylobacter coli strain CC20JX12 chromosome, complete genome	blastn	16200	300	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter coli
14448217	14448217	PRJNA415856_P_NODE_33592_length_169_cov_1.116667_g33331_i0	PRJNA415856	33592	169	1.116667	1.88716723	Campylobacter showae	204	Bacteria	Bacteria	274	2.7699999999999997e-69	NTclustered	gi\|1622747600\|gb\|CP012544.1\|	204	g33331	i0	95.858	10.1420118343195	169	7	100	0	1	169	721315	721147	Campylobacter showae strain ATCC 51146 chromosome, complete genome	blastn	1714	274	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
15111107	15111107	PRJNA415856_P_NODE_20892_length_192_cov_1.069930_g20631_i0	PRJNA415856	20892	192	1.06993	2.0542656	Arcobacteraceae	2808963	Bacteria	Bacteria	300	5.350000000000001e-77	NTclustered	gi\|1898123824\|gb\|CP060693.1\|	28198	g20631	i0	94.792	404.03125	192	10	100	0	1	192	71444	71253	Aliarcobacter cryaerophilus strain 16CS1285-4 chromosome, complete genome	blastn	77574	300	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Arcobacteraceae	Aliarcobacter	Aliarcobacter cryaerophilus
15111234	15111234	PRJNA415856_P_NODE_38352_length_166_cov_0.871795_g38091_i0	PRJNA415856	38352	166	0.871795	1.4471797	Campylobacter	194	Bacteria	Bacteria	307	2.69e-79	NTclustered	gi\|1752751018\|gb\|CP044165.1\|	195	g38091	i0	100	100	166	0	100	0	1	166	697496	697661	Campylobacter coli strain AR-0416 chromosome, complete genome	blastn	16600	307	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter coli
15111246	15111246	PRJNA415856_P_NODE_40392_length_165_cov_0.879310_g40131_i0	PRJNA415856	40392	165	0.87931	1.4508615	Campylobacter	194	Bacteria	Bacteria	305	9.59e-79	NTclustered	gi\|1100599896\|gb\|CP017859.1\|	197	g40131	i0	100	100	165	0	100	0	1	165	1500452	1500616	Campylobacter jejuni strain YQ2210, complete genome	blastn	16500	305	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
16996823	16996823	PRJNA415856_P_NODE_44714_length_164_cov_0.886957_g44453_i0	PRJNA415856	44714	164	0.886957	1.45460948	Campylobacter ureolyticus	827	Bacteria	Bacteria	303	3.42e-78	NTclustered	gi\|909715533\|gb\|CP012195.1\|	1032069	g44453	i0	100	3.94512195121951	164	0	100	0	1	164	1299432	1299595	Campylobacter ureolyticus RIGS 9880 chromosome, complete genome	blastn	647	303	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter ureolyticus
18271100	18271100	PRJNA415856_P_NODE_53215_length_161_cov_0.910714_g52954_i0	PRJNA415856	53215	161	0.910714	1.46624954	Campylobacter showae	204	Bacteria	Bacteria	254	3.42e-63	NTclustered	gi\|1622747600\|gb\|CP012544.1\|	204	g52954	i0	95.031	7	161	8	100	0	1	161	1940273	1940113	Campylobacter showae strain ATCC 51146 chromosome, complete genome	blastn	1127	254	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter showae
20209777	20209777	PRJNA415856_P_NODE_50476_length_162_cov_0.902655_g50215_i0	PRJNA415856	50476	162	0.902655	1.4623011	Campylobacter	194	Bacteria	Bacteria	300	4.36e-77	NTclustered	gi\|2794592207\|gb\|CP126359.1\|	195	g50215	i0	100	100	162	0	100	0	1	162	483309	483470	Campylobacter coli strain BfR-CA-19087 chromosome, complete genome	blastn	16200	300	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter coli
20821146	20821146	PRJNA415856_P_NODE_45257_length_163_cov_1.789474_g44996_i0	PRJNA415856	45257	163	1.789474	2.91684262	Campylobacter ureolyticus	827	Bacteria	Bacteria	302	1.22e-77	NTclustered	gi\|1966876394\|gb\|CP068487.1\|	827	g44996	i0	100	7.67484662576687	163	0	100	0	1	163	1136240	1136402	Campylobacter ureolyticus strain FDAARGOS_1102 chromosome	blastn	1251	302	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter ureolyticus
22760600	22760600	PRJNA415856_P_NODE_6978_length_354_cov_1.793443_g6717_i0	PRJNA415856	6978	354	1.793443	6.34878822	root	1	Root_unresolved	Root_unresolved	649	0	NTclustered	gi\|1752751060\|gb\|CP044176.1\|	195	g6717	i0	99.718	129	354	1	100	0	1	354	20767	21120	Campylobacter coli strain AR-0411 plasmid pAR-0411, complete sequence	blastn	45666	654	0.992354740061162	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter coli
23371408	23371408	PRJNA415856_P_NODE_29819_length_175_cov_1.126984_g29558_i0	PRJNA415856	29819	175	1.126984	1.972222	Campylobacter rectus	203	Bacteria	Bacteria	274	2.89e-69	NTclustered	gi\|1622745323\|gb\|CP012543.1\|	203	g29558	i0	94.857	12	175	9	100	0	1	175	2338577	2338751	Campylobacter rectus strain ATCC 33238, complete genome	blastn	2100	274	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter rectus
26758944	26758944	PRJNA415856_P_NODE_381_length_1411_cov_6.279001_g300_i0	PRJNA415856	381	1411	6.279001	88.59670411	Campylobacter jejuni	197	Bacteria	Bacteria	143	2e-36	NR	RTI48602.1	197	g300	i0	48.1	0.278525868178597	131	68	27.9	0	393	1	4	134	RTI48602.1 hypothetical protein C3I27_04060 [Campylobacter jejuni]	diamond	393	143	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
26948916	26948916	PRJNA415856_P_NODE_322_length_1502_cov_5.249828_g250_i0	PRJNA415856	322	1502	5.249828	78.85241656	Helicobacter canis	29419	Bacteria	Bacteria	237	5.09e-73	NR	WP_115010603.1	29419	g250	i0	99.2	0.24167776298269	121	1	24.2	0	723	361	1	121	WP_115010603.1 phage holin family protein [Helicobacter canis]	diamond	363	237	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
27012233	27012233	PRJNA415856_P_NODE_402_length_1389_cov_5.897761_g320_i0	PRJNA415856	402	1389	5.897761	81.91990029	Campylobacter lanienae	75658	Bacteria	Bacteria	291	1.0299999999999999e-92	NR	WP_321071193.1	75658	g320	i0	60.6	0.531317494600432	246	82	52.7	4	1118	387	18	250	WP_321071193.1 phage antirepressor KilAC domain-containing protein [Campylobacter lanienae]	diamond	738	291	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter lanienae
27075552	27075552	PRJNA415856_P_NODE_122_length_2006_cov_6.359223_g92_i0	PRJNA415856	122	2006	6.359223	127.56601338	Campylobacter helveticus	28898	Bacteria	Bacteria	60.5	3.09e-7	NR	WP_082199829.1	28898	g92	i0	33.7	0.469591226321037	101	60	14.8	3	1433	1137	4	99	WP_082199829.1 hypothetical protein [Campylobacter helveticus]	diamond	942	60.5	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter helveticus
27138359	27138359	PRJNA415856_P_NODE_662_length_1144_cov_6.306849_g553_i0	PRJNA415856	662	1144	6.306849	72.15035256	uncultured Helicobacter sp.	175537	Bacteria	Bacteria	189	4.33e-54	NR	WP_299327203.1	175537	g553	i0	61.8	0.398601398601399	152	57	39.9	1	44	499	3	153	WP_299327203.1 phage antirepressor KilAC domain-containing protein, partial [uncultured Helicobacter sp.]	diamond	456	189	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	uncultured Helicobacter sp.
27360184	27360184	PRJNA415856_P_NODE_1783_length_744_cov_6.943885_g1576_i0	PRJNA415856	1783	744	6.943885	51.6625044	unclassified Helicobacter	2593540	Bacteria	Bacteria	286	4.369999999999999e-95	NR	WP_285256502.1	2593540	g1576	i0	90.8	0.657258064516129	163	15	65.7	0	3	491	24	186	WP_285256502.1 MULTISPECIES: hypothetical protein [unclassified Helicobacter]	diamond	489	286	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter
27486383	27486383	PRJNA415856_P_NODE_23563_length_186_cov_1.489051_g23302_i0	PRJNA415856	23563	186	1.489051	2.76963486	Campylobacter sp. RM16187	1660063	Bacteria	Bacteria	120	3.8499999999999996e-31	NR	WP_260953213.1	1660063	g23302	i0	90.3	1	62	6	100	0	186	1	227	288	WP_260953213.1 adenine-specific methyltransferase EcoRI family protein [Campylobacter sp. RM16187]	diamond	186	120	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter sp. RM16187
27707854	27707854	PRJNA415856_P_NODE_364_length_1442_cov_6.678392_g285_i0	PRJNA415856	364	1442	6.678392	96.30241264	Campylobacter jejuni	197	Bacteria	Bacteria	50.1	0.0151	NR	WP_126232126.1	197	g285	i0	29.5	0.30998613037448	149	81	30.8	5	1018	575	207	332	WP_126232126.1 hypothetical protein [Campylobacter jejuni]	diamond	447	50.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
27896722	27896722	PRJNA415856_P_NODE_5_length_6435_cov_9.514563_g4_i0	PRJNA415856	5	6435	9.514563	612.26212905	Helicobacter sp.	218	Bacteria	Bacteria	172	6.82e-44	NR	HCD73290.1	218	g4	i0	41.4	0.113752913752914	244	138	11.3	3	2577	1852	1	241	HCD73290.1 hypothetical protein [Helicobacter sp.]	diamond	732	172	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter sp.
27928424	27928424	PRJNA415856_P_NODE_25_length_3537_cov_8.647936_g19_i0	PRJNA415856	25	3537	8.647936	305.87749632	uncultured Helicobacter sp.	175537	Bacteria	Bacteria	282	6.45e-84	NR	WP_299327320.1	175537	g19	i0	90.9	0.139949109414758	165	15	14	0	496	2	1	165	WP_299327320.1 KilA-N domain-containing protein [uncultured Helicobacter sp.]	diamond	495	282	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	uncultured Helicobacter sp.
27959934	27959934	PRJNA415856_P_NODE_7645_length_333_cov_4.507042_g7384_i0	PRJNA415856	7645	333	4.507042	15.00844986	Helicobacter valdiviensis	1458358	Bacteria	Bacteria	72.4	1.59e-12	NR	WP_111230195.1	1458358	g7384	i0	57.9	1.06306306306306	57	24	51.4	0	182	12	1	57	WP_111230195.1 DNA cytosine methyltransferase [Helicobacter valdiviensis]	diamond	354	72.4	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter valdiviensis
28275611	28275611	PRJNA415856_P_NODE_54706_length_154_cov_4.285714_g54445_i0	PRJNA415856	54706	154	4.285714	6.59999956	Helicobacter pylori	210	Bacteria	Bacteria	80.1	2.04e-18	NR	GAA9125269.1	210	g54445	i0	100	0.681818181818182	35	0	68.2	0	3	107	4	38	GAA9125269.1 hypothetical protein Kyoto190A_0810 [Helicobacter pylori]	diamond	105	80.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
28923670	28923670	PRJNA415856_P_NODE_34828_length_167_cov_1.576271_g34567_i0	PRJNA415856	34828	167	1.576271	2.63237257	Pseudomonadati	3379134	Bacteria	Bacteria	113	3.33e-30	NR	WP_323470372.1	197	g34567	i0	98.2	1.97604790419162	55	1	98.8	0	166	2	96	150	WP_323470372.1 cell division protein FtsQ/DivIB, partial [Campylobacter jejuni]	diamond	330	113	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter jejuni
28970399	28970399	PRJNA415856_P_NODE_488_length_1289_cov_5.697581_g399_i0	PRJNA415856	488	1289	5.697581	73.44181909	uncultured Helicobacter sp.	175537	Bacteria	Bacteria	67.4	1.32e-8	NR	WP_299327207.1	175537	g399	i0	26.1	0.633048875096974	272	150	61.9	10	314	1111	25	251	WP_299327207.1 hypothetical protein [uncultured Helicobacter sp.]	diamond	816	67.4	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	uncultured Helicobacter sp.
28987244	28987244	PRJNA415856_P_NODE_88_length_2267_cov_10.414337_g65_i0	PRJNA415856	88	2267	10.414337	236.09301979	root	1	Root_unresolved	Root_unresolved	118	1.23e-27	NR	WP_150337043.1	29419	g65	i0	76.1	0.742390824878694	71	17	9.4	0	2265	2053	26	96	WP_150337043.1 phage antirepressor KilAC domain-containing protein [Helicobacter canis]	diamond	1683	118	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
29254281	29254281	PRJNA415856_P_NODE_10349_length_275_cov_6.398230_g10088_i0	PRJNA415856	10349	275	6.39823	17.5951325	Helicobacter canis	29419	Bacteria	Bacteria	131	7.779999999999999e-38	NR	WP_115010607.1	29419	g10088	i0	98.4	0.665454545454545	61	1	66.5	0	274	92	24	84	WP_115010607.1 hypothetical protein [Helicobacter canis]	diamond	183	131	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
29507011	29507011	PRJNA415856_P_NODE_2750_length_603_cov_4.978339_g2511_i0	PRJNA415856	2750	603	4.978339	30.01938417	Helicobacter magdeburgensis	471858	Bacteria	Bacteria	90.1	2.09e-18	NR	WP_034588097.1	471858	g2511	i0	43.3	0.482587064676617	97	55	48.3	0	602	312	117	213	WP_034588097.1 hypothetical protein [Helicobacter magdeburgensis]	diamond	291	90.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter magdeburgensis
29727843	29727843	PRJNA415856_P_NODE_28250_length_177_cov_1.593750_g27989_i0	PRJNA415856	28250	177	1.59375	2.8209375	Campylobacter sp. 2	205	Bacteria	Bacteria	81.3	1.04e-17	NR	WP_214120692.1	2836735	g27989	i0	81.6	1.59322033898305	49	9	83.1	0	149	3	59	107	WP_214120692.1 hypothetical protein, partial [Campylobacter sp. 2018MI01]	diamond	282	81.3	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter sp. 2018MI01
30360398	30360398	PRJNA415856_P_NODE_1712_length_759_cov_9.400000_g1513_i0	PRJNA415856	1712	759	9.4	71.346	uncultured Helicobacter sp.	175537	Bacteria	Bacteria	346	1.77e-116	NR	WP_299327288.1	175537	g1513	i0	90.8	0.731225296442688	185	17	73.1	0	205	759	1	185	WP_299327288.1 N-6 DNA methylase [uncultured Helicobacter sp.]	diamond	555	346	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	uncultured Helicobacter sp.
30455079	30455079	PRJNA415856_P_NODE_3073_length_570_cov_6.992322_g2827_i0	PRJNA415856	3073	570	6.992322	39.8562354	uncultured Helicobacter sp.	175537	Bacteria	Bacteria	211	1.72e-64	NR	WP_299327288.1	175537	g2827	i0	77.6	0.752631578947368	143	27	73.2	2	1	417	177	318	WP_299327288.1 N-6 DNA methylase [uncultured Helicobacter sp.]	diamond	429	211	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	uncultured Helicobacter sp.
30738995	30738995	PRJNA415856_P_NODE_1094_length_933_cov_6.876697_g938_i0	PRJNA415856	1094	933	6.876697	64.15958301	Helicobacter sp.	218	Bacteria	Bacteria	82	1.43e-15	NR	WP_290946306.1	218	g938	i0	38	0.321543408360129	100	62	32.2	0	820	521	1	100	WP_290946306.1 hypothetical protein [Helicobacter sp.]	diamond	300	82	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter sp.
30913830	30913830	PRJNA415856_P_NODE_40694_length_165_cov_0.879310_g40433_i0	PRJNA415856	40694	165	0.87931	1.4508615	root	1	Root_unresolved	Root_unresolved	45.8	4.7e-4	NR	GAA9396157.1	210	g40433	i0	78.3	3.38181818181818	23	5	41.8	0	70	2	82	104	GAA9396157.1 hypothetical protein BTM418_15410 [Helicobacter pylori]	diamond	558	45.8	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
31307806	31307806	PRJNA415856_P_NODE_44175_length_164_cov_0.886957_g43914_i0	PRJNA415856	44175	164	0.886957	1.45460948	Campylobacter concisus	199	Bacteria	Bacteria	104	3.74e-25	NR	WP_148820009.1	199	g43914	i0	92.6	0.98780487804878	54	4	98.8	0	2	163	234	287	WP_148820009.1 ParA family protein [Campylobacter concisus]	diamond	162	104	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter concisus
31908899	31908899	PRJNA415856_P_NODE_51177_length_161_cov_1.633929_g50916_i0	PRJNA415856	51177	161	1.633929	2.63062569	Helicobacter canis	29419	Bacteria	Bacteria	106	1.47e-26	NR	WP_115010637.1	29419	g50916	i0	100	0.987577639751553	53	0	98.8	0	161	3	163	215	WP_115010637.1 hypothetical protein [Helicobacter canis]	diamond	159	106	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
31972111	31972111	PRJNA415856_P_NODE_42138_length_165_cov_0.879310_g41877_i0	PRJNA415856	42138	165	0.87931	1.4508615	Helicobacter canis	29419	Bacteria	Bacteria	100	5.73e-23	NR	WP_150337192.1	29419	g41877	i0	96.3	3.92727272727273	54	2	98.2	0	3	164	385	438	WP_150337192.1 methyl-accepting chemotaxis protein [Helicobacter canis]	diamond	648	100	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter canis
32115495	32115495	PRJNA415856_P_NODE_23038_length_187_cov_1.398551_g22777_i0	PRJNA415856	23038	187	1.398551	2.61529037	root	1	Root_unresolved	Root_unresolved	52	1.43e-6	NR	MDU9757963.1	210	g22777	i0	50	19.7647058823529	44	18	70.6	1	28	159	57	96	MDU9757963.1 endonuclease [Helicobacter pylori]	diamond	3696	52	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter pylori
32368742	32368742	PRJNA415856_P_NODE_2659_length_613_cov_5.856383_g2421_i0	PRJNA415856	2659	613	5.856383	35.89962779	Campylobacter	194	Bacteria	Bacteria	243	4.41e-78	NR	EAJ6150330.1	201	g2421	i0	62.6	2.65742251223491	187	64	89.1	2	1	546	25	210	EAJ6150330.1 DNA (cytosine-5-)-methyltransferase [Campylobacter lari]	diamond	1629	243	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter lari
32621297	32621297	PRJNA415856_P_NODE_41660_length_165_cov_0.879310_g41399_i0	PRJNA415856	41660	165	0.87931	1.4508615	Pseudomonadati	3379134	Bacteria	Bacteria	65.1	4.34e-12	NR	MFC2588121.1	205	g41399	i0	100	3.38181818181818	31	0	56.4	0	3	95	58	88	MFC2588121.1 preprotein translocase subunit SecY [Campylobacter sp.]	diamond	558	65.1	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Campylobacteraceae	Campylobacter	Campylobacter sp.
32841686	32841686	PRJNA415856_P_NODE_240_length_1647_cov_9.135169_g186_i0	PRJNA415856	240	1647	9.135169	150.45623343	Helicobacter	209	Bacteria	Bacteria	305	1.29e-96	NR	WP_115026573.1	213	g186	i0	64.2	0.794171220400729	229	72	40.1	2	2	661	44	271	WP_115026573.1 phosphoadenosine phosphosulfate reductase family protein [Helicobacter cinaedi]	diamond	1308	305	1	Bacteria	Pseudomonadati	Campylobacterota	Epsilonproteobacteria	Campylobacterales	Helicobacteraceae	Helicobacter	Helicobacter cinaedi

Advanced export

JSON shape: default, array, newline-delimited

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;