contig_metadata
16 rows where bioproject = "PRJNA415856" and tax_kingdom = "Thermoproteati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11286582 | 11286582 | PRJNA415856_P_NODE_1169_length_910_cov_4.167247_g1003_i0 | PRJNA415856 | 1169 | 910 | 4.167247 | 37.9219477 | Nitrososphaera | 497726 | Archaea | Archaea | 1123 | 0 | NTclustered | gi|300521484|gb|GU797787.1| | 497727 | g1003 | i0 | 89.207 | 52.810989010989 | 908 | 87 | 99 | 10 | 6 | 909 | 921 | 21 | Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence | blastn | 48058 | 1123 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera gargensis | ||
| 13173068 | 13173068 | PRJNA415856_P_NODE_311_length_1522_cov_3.315682_g241_i0 | PRJNA415856 | 311 | 1522 | 3.315682 | 50.46468004 | uncultured crenarchaeote | 29281 | Archaea | Archaea | 2206 | 0 | NTclustered | gi|22797874|emb|AJ496176.1| | 29281 | g241 | i0 | 92.857 | 102.687253613666 | 1526 | 99 | 100 | 8 | 1 | 1522 | 6919 | 8438 | Uncultured crenarchaeote 34 kb genomic fragment | blastn | 156290 | 2206 | 1 | Archaea | Thermoproteati | Thermoproteota | uncultured crenarchaeote | ||||||
| 18270862 | 18270862 | PRJNA415856_P_NODE_23895_length_185_cov_2.397059_g23634_i0 | PRJNA415856 | 23895 | 185 | 2.397059 | 4.43455915 | Sulfolobaceae archaeon | 2967306 | Archaea | Archaea | 103 | 6.3799999999999996e-24 | NR | MEM0173168.1 | 2967306 | g23634 | i0 | 75 | 0.972972972972973 | 60 | 15 | 97.3 | 0 | 2 | 181 | 332 | 391 | MEM0173168.1 hypothetical protein [Sulfolobaceae archaeon] | diamond | 180 | 103 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Sulfolobales | Sulfolobaceae | Sulfolobaceae archaeon | |||
| 19545251 | 19545251 | PRJNA415856_P_NODE_44476_length_164_cov_0.886957_g44215_i0 | PRJNA415856 | 44476 | 164 | 0.886957 | 1.45460948 | Archaea | 2157 | Archaea | Archaea | 102 | 6.649999999999998e-24 | NR | MBI3638791.1 | 2026795 | g44215 | i0 | 88.9 | 8.89024390243902 | 54 | 6 | 98.8 | 0 | 1 | 162 | 57 | 110 | MBI3638791.1 4-hydroxyphenylacetate 3-hydroxylase family protein [Nitrososphaerota archaeon] | diamond | 1458 | 102 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaerota archaeon | ||||||
| 21485364 | 21485364 | PRJNA415856_P_NODE_9657_length_287_cov_2.310924_g9396_i0 | PRJNA415856 | 9657 | 287 | 2.310924 | 6.63235188 | Nitrososphaera | 497726 | Archaea | Archaea | 479 | 1.0299999999999996e-130 | NTclustered | gi|300521484|gb|GU797787.1| | 497727 | g9396 | i0 | 97.5 | 42.3728222996516 | 280 | 7 | 98 | 0 | 6 | 285 | 921 | 642 | Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence | blastn | 12161 | 479 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera gargensis | ||
| 25309521 | 25309521 | PRJNA415856_P_NODE_17720_length_207_cov_1.094937_g17459_i0 | PRJNA415856 | 17720 | 207 | 1.094937 | 2.26651959 | Nitrososphaera | 497726 | Archaea | Archaea | 316 | 5.819999999999998e-82 | NTclustered | gi|300521484|gb|GU797787.1| | 497727 | g17459 | i0 | 94.203 | 36.0821256038647 | 207 | 12 | 100 | 0 | 1 | 207 | 1772 | 1566 | Candidatus Nitrososphaera gargensis 23S ribosomal RNA gene, partial sequence | blastn | 7469 | 316 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Candidatus Nitrososphaera gargensis | ||
| 27739304 | 27739304 | PRJNA415856_P_NODE_21564_length_190_cov_1.219858_g21303_i0 | PRJNA415856 | 21564 | 190 | 1.219858 | 2.3177302 | Sulfolobaceae archaeon | 2967306 | Archaea | Archaea | 67.4 | 2.75e-11 | NR | MEM0174246.1 | 2967306 | g21303 | i0 | 50.8 | 0.963157894736842 | 61 | 30 | 96.3 | 0 | 188 | 6 | 110 | 170 | MEM0174246.1 helix-turn-helix domain-containing protein [Sulfolobaceae archaeon] | diamond | 183 | 67.4 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Sulfolobales | Sulfolobaceae | Sulfolobaceae archaeon | |||
| 28608091 | 28608091 | PRJNA415856_P_NODE_49447_length_162_cov_0.902655_g49186_i0 | PRJNA415856 | 49447 | 162 | 0.902655 | 1.4623011 | Nitrososphaeria | 1643678 | Archaea | Archaea | 70.5 | 6.07e-13 | NR | RPJ25338.1 | 2026768 | g49186 | i0 | 88.6 | 1.66666666666667 | 44 | 5 | 81.5 | 0 | 31 | 162 | 1 | 44 | RPJ25338.1 MAG: hypothetical protein EHM25_13540, partial [Nitrosopumilales archaeon] | diamond | 270 | 70.5 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrosopumilales | Nitrosopumilales archaeon | ||||
| 28906960 | 28906960 | PRJNA415856_P_NODE_48388_length_162_cov_1.469027_g48127_i0 | PRJNA415856 | 48388 | 162 | 1.469027 | 2.37982374 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 111 | 4.68e-29 | NR | HEX2407753.1 | 2169593 | g48127 | i0 | 88.7 | 9.81481481481481 | 53 | 6 | 98.1 | 0 | 2 | 160 | 56 | 108 | HEX2407753.1 DDE-type integrase/transposase/recombinase [Nitrososphaeraceae archaeon] | diamond | 1590 | 111 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 29538580 | 29538580 | PRJNA415856_P_NODE_24010_length_185_cov_1.500000_g23749_i0 | PRJNA415856 | 24010 | 185 | 1.5 | 2.775 | Sulfolobaceae archaeon | 2967306 | Archaea | Archaea | 49.3 | 5.44e-5 | NR | MEM0173399.1 | 2967306 | g23749 | i0 | 45 | 0.972972972972973 | 60 | 33 | 97.3 | 0 | 180 | 1 | 7 | 66 | MEM0173399.1 hypothetical protein [Sulfolobaceae archaeon] | diamond | 180 | 49.3 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Sulfolobales | Sulfolobaceae | Sulfolobaceae archaeon | |||
| 30439936 | 30439936 | PRJNA415856_P_NODE_8993_length_300_cov_1.884462_g8732_i0 | PRJNA415856 | 8993 | 300 | 1.884462 | 5.653386 | root | 1 | Root_unresolved | Root_unresolved | 85.1 | 1.87e-17 | NR | MEK6877666.1 | 2056631 | g8732 | i0 | 75 | 0.97 | 48 | 12 | 48 | 0 | 1 | 144 | 220 | 267 | MEK6877666.1 site-specific DNA-methyltransferase [Thermoproteota archaeon] | diamond | 291 | 85.9 | 0.990686845168801 | Archaea | Thermoproteati | Thermoproteota | Thermoproteota archaeon | ||||||
| 30517910 | 30517910 | PRJNA415856_P_NODE_26613_length_180_cov_1.557252_g26352_i0 | PRJNA415856 | 26613 | 180 | 1.557252 | 2.8030536 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 90.5 | 7.95e-20 | NR | HJR46673.1 | 2169593 | g26352 | i0 | 78.9 | 1.9 | 57 | 12 | 95 | 0 | 8 | 178 | 1 | 57 | HJR46673.1 site-specific integrase [Nitrososphaeraceae archaeon] | diamond | 342 | 90.5 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 31813978 | 31813978 | PRJNA415856_P_NODE_46477_length_163_cov_0.894737_g46216_i0 | PRJNA415856 | 46477 | 163 | 0.894737 | 1.45842131 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 120 | 1.45e-33 | NR | HET6640053.1 | 2169593 | g46216 | i0 | 100 | 1.95092024539877 | 53 | 0 | 97.5 | 0 | 161 | 3 | 64 | 116 | HET6640053.1 cbb3-type cytochrome c oxidase subunit I [Nitrososphaeraceae archaeon] | diamond | 318 | 120 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 31908887 | 31908887 | PRJNA415856_P_NODE_28457_length_177_cov_1.367188_g28196_i0 | PRJNA415856 | 28457 | 177 | 1.367188 | 2.41992276 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 79.3 | 2.11e-16 | NR | HXW12010.1 | 2169593 | g28196 | i0 | 77.6 | 0.983050847457627 | 58 | 13 | 98.3 | 0 | 2 | 175 | 42 | 99 | HXW12010.1 hypothetical protein [Nitrososphaeraceae archaeon] | diamond | 174 | 79.3 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 32257283 | 32257283 | PRJNA415856_P_NODE_50138_length_162_cov_0.902655_g49877_i0 | PRJNA415856 | 50138 | 162 | 0.902655 | 1.4623011 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 48.5 | 2.96e-5 | NR | MDW0283126.1 | 2169593 | g49877 | i0 | 66.7 | 1.09259259259259 | 30 | 10 | 55.6 | 0 | 2 | 91 | 93 | 122 | MDW0283126.1 ArsR family transcriptional regulator [Nitrososphaeraceae archaeon] | diamond | 177 | 48.5 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon | |||
| 32446994 | 32446994 | PRJNA415856_P_NODE_11919_length_254_cov_1.068293_g11658_i0 | PRJNA415856 | 11919 | 254 | 1.068293 | 2.71346422 | Nitrososphaera sp. | 1971748 | Archaea | Archaea | 43.9 | 0.0163 | NR | HVX03469.1 | 1971748 | g11658 | i0 | 37.8 | 0.874015748031496 | 74 | 36 | 87.4 | 3 | 27 | 248 | 405 | 468 | HVX03469.1 glycosyltransferase family 2 protein [Nitrososphaera sp.] | diamond | 222 | 43.9 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaera | Nitrososphaera sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;