contig_metadata
10 rows where bioproject = "PRJNA415856", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4911614 | 4911614 | PRJNA415856_P_NODE_55264_length_152_cov_2.038835_g55003_i0 | PRJNA415856 | 55264 | 152 | 2.038835 | 3.0990292 | Sorangium | 39643 | Bacteria | Bacteria | 183 | 4.22e-42 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g55003 | i0 | 88.667 | 373.210526315789 | 150 | 17 | 99 | 0 | 2 | 151 | 4330536 | 4330685 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 56728 | 183 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 6186495 | 6186495 | PRJNA415856_P_NODE_30065_length_174_cov_1.632000_g29804_i0 | PRJNA415856 | 30065 | 174 | 1.632 | 2.83968 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 91.3 | 9.02e-22 | NR | HEX2875979.1 | 2268199 | g29804 | i0 | 78.9 | 1.96551724137931 | 57 | 12 | 98.3 | 0 | 172 | 2 | 30 | 86 | HEX2875979.1 BlaI/MecI/CopY family transcriptional regulator [Polyangiaceae bacterium] | diamond | 342 | 91.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 20820950 | 20820950 | PRJNA415856_P_NODE_20757_length_192_cov_2.041958_g20496_i0 | PRJNA415856 | 20757 | 192 | 2.041958 | 3.92055936 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 127 | 1.04e-34 | NR | MDQ3337212.1 | 2818507 | g20496 | i0 | 89.1 | 2 | 64 | 7 | 100 | 0 | 1 | 192 | 162 | 225 | MDQ3337212.1 molybdopterin-dependent oxidoreductase [Myxococcota bacterium] | diamond | 384 | 127 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 24035141 | 24035141 | PRJNA415856_P_NODE_20299_length_194_cov_1.758621_g20038_i0 | PRJNA415856 | 20299 | 194 | 1.758621 | 3.41172474 | Archangium | 47 | Bacteria | Bacteria | 243 | 9.26e-60 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g20038 | i0 | 89.394 | 253.680412371134 | 198 | 14 | 100 | 7 | 1 | 194 | 108071 | 108265 | Archangium gephyra strain DSM 2261, complete genome | blastn | 49214 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 26695613 | 26695613 | PRJNA415856_P_NODE_28921_length_176_cov_1.582677_g28660_i0 | PRJNA415856 | 28921 | 176 | 1.582677 | 2.78551152 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 79.7 | 8.92e-17 | NR | HEY4243399.1 | 2212474 | g28660 | i0 | 87.2 | 1.32954545454545 | 39 | 5 | 66.5 | 0 | 60 | 176 | 1 | 39 | HEY4243399.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 234 | 79.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 26758942 | 26758942 | PRJNA415856_P_NODE_35221_length_167_cov_0.864407_g34960_i0 | PRJNA415856 | 35221 | 167 | 0.864407 | 1.44355969 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 43.9 | 0.00513 | NR | WP_136920640.1 | 2567896 | g34960 | i0 | 38.5 | 0.934131736526946 | 52 | 32 | 93.4 | 0 | 2 | 157 | 32 | 83 | WP_136920640.1 polyprenyl synthetase family protein [Polyangium aurulentum] | diamond | 156 | 43.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 29081789 | 29081789 | PRJNA415856_P_NODE_29928_length_174_cov_2.448000_g29667_i0 | PRJNA415856 | 29928 | 174 | 2.448 | 4.25952 | Bacteria | 2 | Bacteria | Bacteria | 52 | 8.24e-6 | NR | HHO50487.1 | 2026735 | g29667 | i0 | 64.9 | 2.68965517241379 | 37 | 13 | 63.8 | 0 | 120 | 10 | 575 | 611 | HHO50487.1 LysM peptidoglycan-binding domain-containing protein [Deltaproteobacteria bacterium] | diamond | 468 | 52 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30408466 | 30408466 | PRJNA415856_P_NODE_48813_length_162_cov_0.902655_g48552_i0 | PRJNA415856 | 48813 | 162 | 0.902655 | 1.4623011 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 82 | 9.22e-17 | NR | MCB9642660.1 | 2026763 | g48552 | i0 | 73.6 | 2.94444444444444 | 53 | 14 | 98.1 | 0 | 3 | 161 | 141 | 193 | MCB9642660.1 M28 family peptidase [Myxococcales bacterium] | diamond | 477 | 82.8 | 0.990338164251208 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 31023465 | 31023465 | PRJNA415856_P_NODE_37235_length_166_cov_1.743590_g36974_i0 | PRJNA415856 | 37235 | 166 | 1.74359 | 2.8943594 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 44.7 | 0.00273 | NR | HEX9622022.1 | 2268199 | g36974 | i0 | 60.6 | 0.596385542168675 | 33 | 13 | 59.6 | 0 | 4 | 102 | 231 | 263 | HEX9622022.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase [Polyangiaceae bacterium] | diamond | 99 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 31055325 | 31055325 | PRJNA415856_P_NODE_15295_length_222_cov_1.884393_g15034_i0 | PRJNA415856 | 15295 | 222 | 1.884393 | 4.18335246 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 42.4 | 0.0367 | NR | NOY91644.1 | 2026735 | g15034 | i0 | 33.9 | 0.756756756756757 | 56 | 37 | 75.7 | 0 | 215 | 48 | 122 | 177 | NOY91644.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 168 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;