RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA415856", tax_kingdom = "Nanobdellati" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_kingdom 1

  • Nanobdellati · 3 ✖

bioproject 1

  • PRJNA415856 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28307305 28307305 PRJNA415856_P_NODE_18306_length_204_cov_0.987097_g18045_i0 PRJNA415856 18306 204 0.987097 2.01367788 Candidatus Aenigmatarchaeota archaeon 3121606 Archaea Archaea 49.7 5.15e-5   NR MBU5575405.1 3121606 g18045 i0 57.9 1.76470588235294 38 16 55.9 0 119 6 5 42 MBU5575405.1 dTMP kinase [Candidatus Aenigmatarchaeota archaeon] diamond 360 49.7 1 Archaea   Nanobdellati Candidatus Aenigmatarchaeota         Candidatus Aenigmatarchaeota archaeon
28433659 28433659 PRJNA415856_P_NODE_42786_length_164_cov_1.591304_g42525_i0 PRJNA415856 42786 164 1.591304 2.60973856 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 50.8 1.77e-5   NR MBN2459890.1 2026803 g42525 i0 51 1.86585365853659 51 21 93.3 1 154 2 561 607 MBN2459890.1 VWA domain-containing protein [Candidatus Woesearchaeota archaeon] diamond 306 50.8 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
31813970 31813970 PRJNA415856_P_NODE_27777_length_178_cov_1.558140_g27516_i0 PRJNA415856 27777 178 1.55814 2.7734892 Candidatus Micrarchaeaceae archaeon 2953041 Archaea Archaea 110 6.66e-29   NR MEM3247443.1 2953041 g27516 i0 89.8 0.99438202247191 59 6 99.4 0 178 2 18 76 MEM3247443.1 hypothetical protein [Candidatus Micrarchaeaceae archaeon] diamond 177 110 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Micrarchaeales Candidatus Micrarchaeaceae   Candidatus Micrarchaeaceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;