RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA415856", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA415856 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27296844 27296844 PRJNA415856_P_NODE_10203_length_278_cov_1.812227_g9942_i0 PRJNA415856 10203 278 1.812227 5.03799106 Zancudomyces culisetae 1213189 Fungi Fungi 62 9.11e-9   NR OMH81178.1 1213189 g9942 i0 39.6 3.74460431654676 91 46 98.2 2 274 2 270 351 OMH81178.1 Antizyme inhibitor 2 [Zancudomyces culisetae] diamond 1041 62 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Zancudomyces Zancudomyces culisetae
28433654 28433654 PRJNA415856_P_NODE_31466_length_172_cov_1.398374_g31205_i0 PRJNA415856 31466 172 1.398374 2.40520328 Piptocephalis tieghemiana 1286916 Fungi Fungi 69.3 6.7e-13   NR KAI9230608.1 1286916 g31205 i0 52.6 0.994186046511628 57 27 99.4 0 2 172 80 136 KAI9230608.1 MAG: translationally controlled tumor-associated [Piptocephalis tieghemiana] diamond 171 69.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis tieghemiana
28843863 28843863 PRJNA415856_P_NODE_23348_length_186_cov_2.525547_g23087_i0 PRJNA415856 23348 186 2.525547 4.69751742 Basidiobolus ranarum 34480 Fungi Fungi 52.4 6.41e-6   NR KAK9720083.1 34480 g23087 i0 63.9 1.16129032258065 36 13 58.1 0 182 75 274 309 KAK9720083.1 hypothetical protein K7432_004345 [Basidiobolus ranarum] diamond 216 52.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;