RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA415856" and tax_clade = "Stenosarchaea group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA415856 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17660962 17660962 PRJNA415856_P_NODE_2674_length_611_cov_26.439502_g2436_i0 PRJNA415856 2674 611 26.439502 161.54535722 root 1 Root_unresolved Root_unresolved 1088 0   NTclustered gi|2621785414|emb|OY781872.1| 1005933 g2436 i0 98.852 398.576104746318 610 7 99 0 1 610 3115894 3116503 MAG: uncultured Methanoregula sp. isolate a338d9b7-13de-4e9d-8f1a-cfe667c23436 genome assembly, chromosome: 1 blastn 243530 1088 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
27517971 27517971 PRJNA415856_P_NODE_43063_length_164_cov_1.052174_g42802_i0 PRJNA415856 43063 164 1.052174 1.72556536 Halococcus agarilyticus 1232219 Archaea Archaea 105 1.13e-24   NR WP_049902900.1 1232219 g42802 i0 94.3 0.969512195121951 53 3 97 0 1 159 207 259 WP_049902900.1 phosphate ABC transporter permease PstA [Halococcus agarilyticus] diamond 159 105 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus agarilyticus
30043897 30043897 PRJNA415856_P_NODE_28411_length_177_cov_1.507812_g28150_i0 PRJNA415856 28411 177 1.507812 2.66882724 Saliphagus sp. LR7 2282654 Archaea Archaea 79.7 1.12e-15   NR WP_114578608.1 2282654 g28150 i0 71.2 1 59 17 100 0 1 177 164 222 WP_114578608.1 ISH3 family transposase [Saliphagus sp. LR7] diamond 177 79.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Saliphagus Saliphagus sp. LR7

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;