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contig_metadata

16 rows where bioproject = "PRJNA415856", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 16 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 16 ✖

bioproject 1

  • PRJNA415856 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4246418 4246418 PRJNA415856_P_NODE_38384_length_166_cov_0.871795_g38123_i0 PRJNA415856 38384 166 0.871795 1.4471797 Strongyloides ratti 34506 Nematoda Nematoda 97.1 6.33e-16   NTclustered gi|1376144623|ref|XM_024652778.1| 34506 g38123 i0 83.962 0.63855421686747 106 11 62 5 20 122 640 538 Strongyloides ratti INO80 complex subunit E (SRAE_2000178600), partial mRNA blastn 106 97.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
4911611 4911611 PRJNA415856_P_NODE_54724_length_154_cov_3.314286_g54463_i0 PRJNA415856 54724 154 3.314286 5.10400044 Metazoa 33208 Nematoda Nematoda 134 4.39e-27   NTclustered gi|1376157049|ref|XM_024645950.1| 34506 g54463 i0 86.29 34 124 16 81 1 3 126 765 643 Strongyloides ratti Myosin heavy chain (SRAE_0000010500), partial mRNA blastn 5236 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
6796987 6796987 PRJNA415856_P_NODE_22486_length_188_cov_1.460432_g22225_i0 PRJNA415856 22486 188 1.460432 2.74561216 Strongyloides ratti 34506 Nematoda Nematoda 52.8 0.016   NTclustered gi|1376154095|ref|XM_024646641.1| 34506 g22225 i0 96.774 0.164893617021277 31 1 16 0 128 158 167 197 Strongyloides ratti Zona pellucida domain-containing protein (SRAE_X000123300), partial mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
14448377 14448377 PRJNA415856_P_NODE_55452_length_150_cov_4.227723_g55191_i0 PRJNA415856 55452 150 4.227723 6.3415845 Metazoa 33208 Nematoda Nematoda 89.7 9.37e-20   NR EJW81040.1 6293 g55191 i0 80 71.84 50 10 100 0 1 150 39 88 EJW81040.1 eukaryotic initiation factor 4A-III, partial [Wuchereria bancrofti] diamond 10776 90.5 0.991160220994475 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Wuchereria Wuchereria bancrofti
24035327 24035327 PRJNA415856_P_NODE_50999_length_161_cov_1.821429_g50738_i0 PRJNA415856 50999 161 1.821429 2.93250069 Metazoa 33208 Nematoda Nematoda 122 1.0099999999999999e-23   NTclustered gi|11095068|gb|AC084619.1|CBRG44K07 6238 g50738 i0 80.503 2.94409937888199 159 31 99 0 3 161 6484 6642 Caenorhabditis briggsae cosmid G44K07, complete sequence blastn 474 122 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
27092205 27092205 PRJNA415856_P_NODE_34102_length_168_cov_1.529412_g33841_i0 PRJNA415856 34102 168 1.529412 2.56941216 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.2 3.62e-8   NR EYB92467.1 53326 g33841 i0 59.1 6.35714285714286 44 18 78.6 0 135 4 36 79 EYB92467.1 hypothetical protein Y032_0193g1383 [Ancylostoma ceylanicum] diamond 1068 56.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma ceylanicum
27201795 27201795 PRJNA415856_P_NODE_31722_length_171_cov_2.688525_g31461_i0 PRJNA415856 31722 171 2.688525 4.59737775 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 42.4 0.0193   NR KAI6183696.1 293665 g31461 i0 45.9 1.47368421052632 37 20 64.9 0 21 131 56 92 KAI6183696.1 hypothetical protein M3Y97_00516800 [Aphelenchoides bicaudatus] diamond 252 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
27644456 27644456 PRJNA415856_P_NODE_14744_length_226_cov_1.728814_g14483_i0 PRJNA415856 14744 226 1.728814 3.90711964 Ancylostoma duodenale 51022 Nematoda Nematoda 61.6 3.23e-9   NR KIH49339.1 51022 g14483 i0 80.6 0.942477876106195 36 7 47.8 0 223 116 3 38 KIH49339.1 ankyrin repeat protein, partial [Ancylostoma duodenale] diamond 213 61.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma duodenale
27928418 27928418 PRJNA415856_P_NODE_13625_length_235_cov_1.833333_g13364_i0 PRJNA415856 13625 235 1.833333 4.30833255 Onchocerca flexuosa 387005 Nematoda Nematoda 62.4 4.03e-9   NR OZC07157.1 387005 g13364 i0 50.8 0.804255319148936 63 27 79.1 2 235 50 67 126 OZC07157.1 hypothetical protein X798_05847 [Onchocerca flexuosa] diamond 189 62.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Onchocerca Onchocerca flexuosa
28576473 28576473 PRJNA415856_P_NODE_28947_length_176_cov_1.535433_g28686_i0 PRJNA415856 28947 176 1.535433 2.70236208 Metazoa 33208 Nematoda Nematoda 110 1.27e-28   NR VDM41684.1 6265 g28686 i0 87.9 142.329545454545 58 7 98.9 0 174 1 20 77 VDM41684.1 unnamed protein product [Toxocara canis] diamond 25050 110 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
29871090 29871090 PRJNA415856_P_NODE_14631_length_227_cov_1.505618_g14370_i0 PRJNA415856 14631 227 1.505618 3.41775286 Pristionchus 54125 Nematoda Nematoda 42.4 0.0415   NR KAF8383672.1 54126 g14370 i0 34.7 1.36123348017621 49 32 64.8 0 159 13 480 528 KAF8383672.1 hypothetical protein PRIPAC_72814 [Pristionchus pacificus] diamond 309 42.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pacificus
31704076 31704076 PRJNA415856_P_NODE_5937_length_390_cov_4.293255_g5676_i0 PRJNA415856 5937 390 4.293255 16.7436945 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 116 1.01e-30   NR CAJ0575662.1 96644 g5676 i0 46.8 2.90769230769231 126 62 93.1 2 377 15 1 126 CAJ0575662.1 unnamed protein product, partial [Mesorhabditis spiculigera] diamond 1134 116 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis spiculigera
31877075 31877075 PRJNA415856_P_NODE_53097_length_161_cov_0.910714_g52836_i0 PRJNA415856 53097 161 0.910714 1.46624954 Heterodera trifolii 157864 Nematoda Nematoda 43.1 0.00914   NR KAL3120703.1 157864 g52836 i0 43.5 0.857142857142857 46 22 85.7 1 152 15 1984 2025 KAL3120703.1 hypothetical protein niasHT_007995 [Heterodera trifolii] diamond 138 43.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera trifolii
32066978 32066978 PRJNA415856_P_NODE_26418_length_181_cov_0.931818_g26157_i0 PRJNA415856 26418 181 0.931818 1.68659058 Steinernema carpocapsae 34508 Nematoda Nematoda 58.9 2.39e-8   NR TMS38221.1 34508 g26157 i0 71.4 0.580110497237569 35 10 58 0 138 34 237 271 TMS38221.1 hypothetical protein L596_004991 [Steinernema carpocapsae] diamond 105 58.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
32447000 32447000 PRJNA415856_P_NODE_38559_length_166_cov_0.871795_g38298_i0 PRJNA415856 38559 166 0.871795 1.4471797 Aphelenchoides bicaudatus 293665 Nematoda Nematoda 46.6 5.81e-4   NR KAI6190246.1 293665 g38298 i0 30.4 1.01204819277108 56 31 86.7 1 23 166 1 56 KAI6190246.1 Glucosylceramidase [Aphelenchoides bicaudatus] diamond 168 46.6 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
32463557 32463557 PRJNA415856_P_NODE_29899_length_174_cov_3.264000_g29638_i0 PRJNA415856 29899 174 3.264 5.67936 Metastrongylidae 55271 Nematoda Nematoda 60.5 8.37e-9   NR KAE9417690.1 6313 g29638 i0 51.8 7.3448275862069 56 27 96.6 0 168 1 53 108 KAE9417690.1 hypothetical protein Angca_010030, partial [Angiostrongylus cantonensis] diamond 1278 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;