RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA415856", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA415856 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8736384 8736384 PRJNA415856_P_NODE_40447_length_165_cov_0.879310_g40186_i0 PRJNA415856 40447 165 0.87931 1.4508615 root 1 Root_unresolved Root_unresolved 102 8.899999999999998e-24   NR XP_057292877.1 13093 g40186 i0 90.7 33.3818181818182 54 5 98.2 0 3 164 179 232 XP_057292877.1 methylmalonyl-CoA mutase, mitochondrial-like [Hydractinia symbiolongicarpus] diamond 5508 103 0.990291262135922 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
11898324 11898324 PRJNA415856_P_NODE_6510_length_369_cov_1.550000_g6249_i0 PRJNA415856 6510 369 1.55 5.7195 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 187 3.24e-57   NR XP_057309555.1 13093 g6249 i0 77.7 6.82926829268293 121 27 98.4 0 6 368 73 193 XP_057309555.1 60S ribosomal protein L7-like [Hydractinia symbiolongicarpus] diamond 2520 187 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
14448386 14448386 PRJNA415856_P_NODE_6872_length_357_cov_3.805195_g6611_i0 PRJNA415856 6872 357 3.805195 13.58454615 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 383 1.0599999999999996e-101   NTclustered gi|2518998737|ref|XM_057450856.1| 13093 g6611 i0 85.994 285.887955182073 357 50 100 0 1 357 398 754 PREDICTED: Hydractinia symbiolongicarpus polyubiquitin-C-like (LOC130645015), mRNA blastn 102062 383 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
15721902 15721902 PRJNA415856_P_NODE_21893_length_189_cov_1.457143_g21632_i0 PRJNA415856 21893 189 1.457143 2.75400027 Dendronephthya gigantea 151771 Cnidaria other_Eukaryota 54.7 0.005   NTclustered gi|1603773303|ref|XM_028554934.1| 151771 g21632 i0 100 0.306878306878307 29 0 15 0 99 127 11693 11665 PREDICTED: Dendronephthya gigantea mucin-19-like (LOC114533419), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea
27661009 27661009 PRJNA415856_P_NODE_43884_length_164_cov_0.886957_g43623_i0 PRJNA415856 43884 164 0.886957 1.45460948 Actiniaria 6103 Cnidaria other_Eukaryota 75.5 3.88e-15   NR XP_020901338.1 2652724 g43623 i0 68.9 4.29878048780488 45 14 82.3 0 162 28 88 132 XP_020901338.1 ras-related protein ced-10 [Exaiptasia diaphana] diamond 705 75.9 0.994729907773386 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana
30787339 30787339 PRJNA415856_P_NODE_49714_length_162_cov_0.902655_g49453_i0 PRJNA415856 49714 162 0.902655 1.4623011 Metazoa 33208 Cnidaria other_Eukaryota 90.9 1.32e-19   NR XP_066933046.1 252671 g49453 i0 82 2.7962962962963 50 9 92.6 0 11 160 244 293 XP_066933046.1 very long-chain specific acyl-CoA dehydrogenase, mitochondrial-like [Clytia hemisphaerica] diamond 453 90.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;