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contig_metadata

22 rows where bioproject = "PRJNA415856" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 22 ✖

bioproject 1

  • PRJNA415856 · 22 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2970124 2970124 PRJNA415856_P_NODE_45003_length_164_cov_0.886957_g44742_i0 PRJNA415856 45003 164 0.886957 1.45460948 Candidatus Nanosynbacter sp. BB002 3393757 Bacteria Bacteria 303 3.42e-78   NTclustered gi|2692798772|gb|CP146064.1| 3393757 g44742 i0 100 2 164 0 100 0 1 164 197879 197716 Candidatus Nanosynbacter sp. BB002 chromosome, complete genome blastn 328 303 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. BB002
9347350 9347350 PRJNA415856_P_NODE_20888_length_192_cov_1.069930_g20627_i0 PRJNA415856 20888 192 1.06993 2.0542656 Candidatus Nanogingivalaceae bacterium 2725942 Bacteria Bacteria 340 3.15e-89   NTclustered gi|2070571752|gb|CP072208.2| 2725942 g20627 i0 98.947 52.8177083333333 190 2 99 0 3 192 111642 111453 MAG: Candidatus Nanogingivalaceae bacterium isolate JCVI_27_bin.3 chromosome, complete genome blastn 10141 340 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Nanosyncoccalia Candidatus Nanogingivales Candidatus Nanogingivalaceae   Candidatus Nanogingivalaceae bacterium
18270937 18270937 PRJNA415856_P_NODE_33335_length_169_cov_1.641667_g33074_i0 PRJNA415856 33335 169 1.641667 2.77441723 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 267 4.63e-67   NTclustered gi|1805660319|gb|CP047920.1| 713059 g33074 i0 96.296 19.491124260355 162 6 96 0 1 162 689702 689863 Candidatus Saccharibacteria bacterium oral taxon 488 strain FS07P chromosome, complete genome blastn 3294 267 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488
21485246 21485246 PRJNA415856_P_NODE_42617_length_164_cov_1.773913_g42356_i0 PRJNA415856 42617 164 1.773913 2.90921732 Candidatus Saccharimonas 1331051 Bacteria Bacteria 272 9.65e-69   NTclustered gi|499052612|gb|CP005957.1| 1332188 g42356 i0 96.933 58.8048780487805 163 3 99 2 1 162 697274 697435 Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome blastn 9644 272 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas aalborgensis
25309734 25309734 PRJNA415856_P_NODE_55260_length_152_cov_2.106796_g54999_i0 PRJNA415856 55260 152 2.106796 3.20232992 Bacteria 2 Bacteria Bacteria 209 6.97e-50   NTclustered gi|563351663|gb|CP006913.1| 1394709 g54999 i0 91.447 118.394736842105 152 13 100 0 1 152 126776 126927 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 17996 209 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
27106988 27106988 PRJNA415856_P_NODE_40782_length_165_cov_0.879310_g40521_i0 PRJNA415856 40782 165 0.87931 1.4508615 candidate division SR1 bacterium 2044938 Bacteria Bacteria 99 1.09e-22   NR MBF0931876.1 2044938 g40521 i0 96.3 0.981818181818182 54 2 98.2 0 4 165 220 273 MBF0931876.1 hypothetical protein [candidate division SR1 bacterium] diamond 162 99 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
27833586 27833586 PRJNA415856_P_NODE_48824_length_162_cov_0.902655_g48563_i0 PRJNA415856 48824 162 0.902655 1.4623011 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 84.7 4.65e-19   NR MDO4870867.1 2026720 g48563 i0 95.7 0.851851851851852 46 2 85.2 0 25 162 1 46 MDO4870867.1 30S ribosomal protein S7 [Candidatus Saccharibacteria bacterium] diamond 138 84.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28307308 28307308 PRJNA415856_P_NODE_26706_length_180_cov_1.534351_g26445_i0 PRJNA415856 26706 180 1.534351 2.7618318 Candidatus Nanosynbacter sp. 2725945 Bacteria Bacteria 116 1.7299999999999999e-28   NR MBF1037421.1 2725945 g26445 i0 89.8 0.983333333333333 59 6 98.3 0 179 3 288 346 MBF1037421.1 hypothetical protein [Candidatus Nanosynbacter sp.] diamond 177 116 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp.
28560012 28560012 PRJNA415856_P_NODE_26227_length_181_cov_1.462121_g25966_i0 PRJNA415856 26227 181 1.462121 2.64643901 Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1 1986206 Bacteria Bacteria 123 1.96e-31   NR WP_129693348.1 1986206 g25966 i0 100 1.95580110497238 60 0 99.4 0 181 2 118 177 WP_129693348.1 dihydrolipoyl dehydrogenase family protein [Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1] diamond 354 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Nanosynsacchari Candidatus Nanosynsacchari sp. TM7_ANC_38.39_G1_1
28623185 28623185 PRJNA415856_P_NODE_34627_length_167_cov_1.728814_g34366_i0 PRJNA415856 34627 167 1.728814 2.88711938 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 83.6 1.09e-17   NR MEO5950029.1 2973664 g34366 i0 74.1 0.970059880239521 54 14 97 0 167 6 19 72 MEO5950029.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 162 83.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
28749342 28749342 PRJNA415856_P_NODE_30847_length_173_cov_1.395161_g30586_i0 PRJNA415856 30847 173 1.395161 2.41362853 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 97.8 5.81e-22   NR RAL56479.1 1914866 g30586 i0 96.5 0.988439306358382 57 2 98.8 0 3 173 377 433 RAL56479.1 hypothetical protein BLM37_03125 [Candidatus Gracilibacteria bacterium GN02-873] diamond 171 97.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
29065190 29065190 PRJNA415856_P_NODE_53208_length_161_cov_0.910714_g52947_i0 PRJNA415856 53208 161 0.910714 1.46624954 Patescibacteria group bacterium 2052139 Bacteria Bacteria 89.7 2.79e-19   NR MDQ5932589.1 2052139 g52947 i0 84.9 1.97515527950311 53 8 98.8 0 1 159 308 360 MDQ5932589.1 hypothetical protein [Patescibacteria group bacterium] diamond 318 89.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29727848 29727848 PRJNA415856_P_NODE_41190_length_165_cov_0.879310_g40929_i0 PRJNA415856 41190 165 0.87931 1.4508615 candidate division SR1 bacterium 2044938 Bacteria Bacteria 67 3.18e-11   NR MBB1556903.1 2044938 g40929 i0 90.9 0.6 33 2 58.2 1 111 16 152 184 MBB1556903.1 hypothetical protein [candidate division SR1 bacterium] diamond 99 67 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
29744504 29744504 PRJNA415856_P_NODE_30750_length_173_cov_1.588710_g30489_i0 PRJNA415856 30750 173 1.58871 2.7484683 Bacteria 2 Bacteria Bacteria 86.7 4.81e-18   NR RKW20009.1 2044595 g30489 i0 97.7 2.23699421965318 43 1 74.6 0 1 129 519 561 RKW20009.1 MAG: Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [Candidatus Altimarinota bacterium] diamond 387 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30170223 30170223 PRJNA415856_P_NODE_22832_length_187_cov_1.905797_g22571_i0 PRJNA415856 22832 187 1.905797 3.56384039 candidate division SR1 bacterium 2044938 Bacteria Bacteria 120 7.4e-30   NR MBB1578361.1 2044938 g22571 i0 94.6 1.79679144385027 56 3 89.8 0 3 170 2453 2508 MBB1578361.1 VCBS repeat-containing protein [candidate division SR1 bacterium] diamond 336 120 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium
30517912 30517912 PRJNA415856_P_NODE_40253_length_165_cov_1.267241_g39992_i0 PRJNA415856 40253 165 1.267241 2.09094765 Patescibacteria group bacterium 2052139 Bacteria Bacteria 43.1 0.00452   NR MDE2098837.1 2052139 g39992 i0 72.4 0.527272727272727 29 8 52.7 0 153 67 102 130 MDE2098837.1 hypothetical protein [Patescibacteria group bacterium] diamond 87 43.1 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
30724069 30724069 PRJNA415856_P_NODE_29594_length_175_cov_1.563492_g29333_i0 PRJNA415856 29594 175 1.563492 2.736111 Bacteria 2 Bacteria Bacteria 72.8 3.35e-13   NR TAH36621.1 2026720 g29333 i0 60.7 2.88 56 21 96 1 171 4 90 144 TAH36621.1 MAG: PrgI family protein [Candidatus Saccharibacteria bacterium] diamond 504 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30960308 30960308 PRJNA415856_P_NODE_114_length_2068_cov_7.932640_g84_i0 PRJNA415856 114 2068 7.93264 164.0469952 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 53.1 0.00101   NR RME58182.1 2762014 g84 i0 36.8 0.210348162475822 76 45 10.6 2 1693 1475 2 77 RME58182.1 MAG: DUF4376 domain-containing protein [Candidatus Parcubacteria bacterium] diamond 435 53.1 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
31244593 31244593 PRJNA415856_P_NODE_3415_length_538_cov_1.871166_g3167_i0 PRJNA415856 3415 538 1.871166 10.06687308 Patescibacteria group bacterium 2052139 Bacteria Bacteria 63.5 7.59e-9   NR MFA5127816.1 2052139 g3167 i0 43 0.440520446096654 79 42 42.4 2 233 6 97 175 MFA5127816.1 hypothetical protein [Patescibacteria group bacterium] diamond 237 63.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
31624143 31624143 PRJNA415856_P_NODE_37196_length_166_cov_1.743590_g36935_i0 PRJNA415856 37196 166 1.74359 2.8943594 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 113 2.0800000000000004e-27   NR MET0502588.1 2838779 g36935 i0 100 0.993975903614458 55 0 99.4 0 2 166 195 249 MET0502588.1 xanthine dehydrogenase family protein molybdopterin-binding subunit [Candidatus Binatia bacterium] diamond 165 113 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31750576 31750576 PRJNA415856_P_NODE_45237_length_163_cov_2.043860_g44976_i0 PRJNA415856 45237 163 2.04386 3.3314918 Candidatus Gracilibacteria bacterium GN 2044595 Bacteria Bacteria 52.8 3.48e-6   NR RAL56531.1 1914866 g44976 i0 92.6 0.496932515337423 27 2 49.7 0 122 42 1 27 RAL56531.1 hypothetical protein BLM37_00540 [Candidatus Gracilibacteria bacterium GN02-873] diamond 81 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium GN02-873
32667670 32667670 PRJNA415856_P_NODE_46560_length_163_cov_0.894737_g46299_i0 PRJNA415856 46560 163 0.894737 1.45842131 Patescibacteria group bacterium 2052139 Bacteria Bacteria 74.3 7.91e-15   NR HYE12046.1 2052139 g46299 i0 66 0.975460122699387 53 18 97.5 0 161 3 3 55 HYE12046.1 hypothetical protein [Patescibacteria group bacterium] diamond 159 74.3 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;