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contig_metadata

12 rows where bioproject = "PRJNA415856" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 12 ✖

bioproject 1

  • PRJNA415856 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11898289 11898289 PRJNA415856_P_NODE_52050_length_161_cov_0.910714_g51789_i0 PRJNA415856 52050 161 0.910714 1.46624954 Cavenderia fasciculata 261658 Evosea other_Eukaryota 67.6 4.78e-7   NTclustered gi|470251839|ref|XM_004358960.1| 261658 g51789 i0 100 32.2422360248447 36 0 22 0 1 36 540 505 Cavenderia fasciculata uncharacterized protein (DFA_01042), partial mRNA blastn 5191 67.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
19545090 19545090 PRJNA415856_P_NODE_26276_length_181_cov_1.378788_g26015_i0 PRJNA415856 26276 181 1.378788 2.49560628 root 1 Root_unresolved Root_unresolved 107 7.890000000000001e-26   NR XP_004360479.1 261658 g26015 i0 83.3 3.97790055248619 60 10 99.4 0 1 180 57 116 XP_004360479.1 S-adenosylmethionine synthetase [Cavenderia fasciculata] diamond 720 107 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
23371594 23371594 PRJNA415856_P_NODE_53539_length_161_cov_0.875000_g53278_i0 PRJNA415856 53539 161 0.875 1.40875 Didymium iridis 5793 Evosea other_Eukaryota 261 2.04e-65   NTclustered gi|2687|emb|X60210.1| 5793 g53278 i0 99.306 16.3416149068323 144 1 89 0 18 161 1516 1373 D.iridis LSU rRNA gene blastn 2631 261 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
25309548 25309548 PRJNA415856_P_NODE_21760_length_189_cov_2.150000_g21499_i0 PRJNA415856 21760 189 2.15 4.0635 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 174 3.32e-39   NTclustered gi|470240647|ref|XM_004354263.1| 261658 g21499 i0 83.511 111.878306878307 188 29 99 2 3 189 424 610 Cavenderia fasciculata ubiquitin (ubqA), partial mRNA blastn 21145 174 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
26807455 26807455 PRJNA415856_P_NODE_12101_length_251_cov_2.316832_g11840_i0 PRJNA415856 12101 251 2.316832 5.81524832 root 1 Root_unresolved Root_unresolved 92.8 5.670000000000001e-22   NR 7SOG_A 5755 g11840 i0 48.2 1.99601593625498 83 43 99.2 0 249 1 24 106 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 501 92.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28654648 28654648 PRJNA415856_P_NODE_34667_length_167_cov_1.728814_g34406_i0 PRJNA415856 34667 167 1.728814 2.88711938 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 112 1.42e-27   NR PRP88645.1 1890364 g34406 i0 100 0.988023952095808 55 0 98.8 0 165 1 251 305 PRP88645.1 SEC14-like protein 2-like [Planoprotostelium fungivorum] diamond 165 112 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29412264 29412264 PRJNA415856_P_NODE_17109_length_210_cov_2.279503_g16848_i0 PRJNA415856 17109 210 2.279503 4.7869563 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 107 2.27e-25   NR PRP75787.1 1890364 g16848 i0 69.1 1.94285714285714 68 21 97.1 0 208 5 114 181 PRP75787.1 hypothetical protein PROFUN_08781 [Planoprotostelium fungivorum] diamond 408 107 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30297239 30297239 PRJNA415856_P_NODE_36472_length_167_cov_0.864407_g36211_i0 PRJNA415856 36472 167 0.864407 1.44355969 Cavenderia fasciculata 261658 Evosea other_Eukaryota 52 7.29e-6   NR XP_004359670.1 261658 g36211 i0 50.9 4.9940119760479 55 27 98.8 0 3 167 110 164 XP_004359670.1 frizzled and smoothened-like protein [Cavenderia fasciculata] diamond 834 52 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30865391 30865391 PRJNA415856_P_NODE_42814_length_164_cov_1.539130_g42553_i0 PRJNA415856 42814 164 1.53913 2.5241732 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 43.9 0.00504   NR PRP74740.1 1890364 g42553 i0 37.9 1.0609756097561 58 31 98.8 2 1 162 327 383 PRP74740.1 hypothetical protein PROFUN_15508 [Planoprotostelium fungivorum] diamond 174 43.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31434342 31434342 PRJNA415856_P_NODE_38876_length_166_cov_0.871795_g38615_i0 PRJNA415856 38876 166 0.871795 1.4471797 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 50.8 1.84e-5   NR PRP80950.1 1890364 g38615 i0 41.2 0.921686746987952 51 30 92.2 0 162 10 190 240 PRP80950.1 hypothetical protein PROFUN_11279 [Planoprotostelium fungivorum] diamond 153 50.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31908896 31908896 PRJNA415856_P_NODE_44117_length_164_cov_0.886957_g43856_i0 PRJNA415856 44117 164 0.886957 1.45460948 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 49.3 6.21e-5   NR PRP86331.1 1890364 g43856 i0 42.6 0.98780487804878 54 29 98.8 1 162 1 83 134 PRP86331.1 putative 1,3-beta-glucanosyltransferase [Planoprotostelium fungivorum] diamond 162 49.3 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32825234 32825234 PRJNA415856_P_NODE_18880_length_201_cov_1.006579_g18619_i0 PRJNA415856 18880 201 1.006579 2.02322379 Heterostelium album PN5 2086695 Evosea other_Eukaryota 97.1 2.58e-22   NR XP_020435746.1 670386 g18619 i0 75 2.85074626865672 64 16 95.5 0 194 3 1 64 XP_020435746.1 ADP/ATP translocase [Heterostelium album PN500] diamond 573 97.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;