RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA415636" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA415636 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26790835 26790835 PRJNA415636_S_NODE_5981_length_212_cov_1.545455_g5934_i0 PRJNA415636 5981 212 1.545455 3.2763646 Corticium candelabrum 121492 Porifera other_Eukaryota 78.6 3.47e-16   NR XP_062522407.1 121492 g5934 i0 60.6 3.70754716981132 66 24 93.4 1 1 198 113 176 XP_062522407.1 large ribosomal subunit protein eL20-like [Corticium candelabrum] diamond 786 78.6 1 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum
30138363 30138363 PRJNA415636_S_NODE_3632_length_258_cov_3.080569_g3585_i0 PRJNA415636 3632 258 3.080569 7.94786802 Dysidea avara 196820 Porifera other_Eukaryota 44.3 0.0129   NR XP_065888507.1 196820 g3585 i0 44.4 0.732558139534884 63 29 66.3 2 178 8 455 517 XP_065888507.1 E3 ubiquitin-protein ligase CBL-B-B-like [Dysidea avara] diamond 189 44.3 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;