contig_metadata
20 rows where bioproject = "PRJNA415636" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1693939 | 1693939 | PRJNA415636_S_NODE_3962_length_250_cov_1.201970_g3915_i0 | PRJNA415636 | 3962 | 250 | 1.20197 | 3.004925 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|2886510793|emb|OZ217345.1| | 28037 | g3915 | i0 | 100 | 99.98 | 250 | 0 | 100 | 0 | 1 | 250 | 1742079 | 1742328 | Streptococcus mitis isolate S. mitis F22 genome assembly, chromosome: 1 | blastn | 24995 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 2969826 | 2969826 | PRJNA415636_S_NODE_5843_length_214_cov_0.916168_g5796_i0 | PRJNA415636 | 5843 | 214 | 0.916168 | 1.96059952 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 357 | 3.5699999999999996e-94 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g5796 | i0 | 96.729 | 1 | 214 | 7 | 100 | 0 | 1 | 214 | 187906 | 188119 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 214 | 357 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 4246174 | 4246174 | PRJNA415636_S_NODE_6104_length_210_cov_2.815951_g6057_i0 | PRJNA415636 | 6104 | 210 | 2.815951 | 5.9134971 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 383 | 5.75e-102 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g6057 | i0 | 99.524 | 1 | 210 | 1 | 100 | 0 | 1 | 210 | 609661 | 609452 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 210 | 383 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 5522883 | 5522883 | PRJNA415636_S_NODE_2945_length_280_cov_1.510730_g2898_i0 | PRJNA415636 | 2945 | 280 | 1.51073 | 4.230044 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 468 | 2.16e-127 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g2898 | i0 | 96.786 | 1 | 280 | 9 | 100 | 0 | 1 | 280 | 537161 | 537440 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 280 | 468 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 13172877 | 13172877 | PRJNA415636_S_NODE_1071_length_400_cov_3.660057_g1024_i0 | PRJNA415636 | 1071 | 400 | 3.660057 | 14.640228 | Paenarthrobacter sp. S56 | 3138179 | Bacteria | Bacteria | 67.6 | 1.37e-6 | NTclustered | gi|2734993624|gb|CP152470.1| | 3138179 | g1024 | i0 | 97.436 | 0.2975 | 39 | 1 | 10 | 0 | 204 | 242 | 3312890 | 3312928 | Paenarthrobacter sp. S56 chromosome, complete genome | blastn | 119 | 67.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Paenarthrobacter | Paenarthrobacter sp. S56 | ||
| 15721779 | 15721779 | PRJNA415636_S_NODE_3953_length_250_cov_2.078818_g3906_i0 | PRJNA415636 | 3953 | 250 | 2.078818 | 5.197045 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 440 | 4.1399999999999976e-119 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g3906 | i0 | 98.406 | 1.004 | 251 | 3 | 100 | 1 | 1 | 250 | 560981 | 561231 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 251 | 440 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 16385690 | 16385690 | PRJNA415636_S_NODE_4113_length_246_cov_2.306533_g4066_i0 | PRJNA415636 | 4113 | 246 | 2.306533 | 5.67407118 | Streptococcus | 1301 | Bacteria | Bacteria | 444 | 3.14e-120 | NTclustered | gi|2246565702|gb|CP097843.1| | 1303 | g4066 | i0 | 99.187 | 100 | 246 | 2 | 100 | 0 | 1 | 246 | 1772641 | 1772396 | Streptococcus oralis strain HP01 chromosome, complete genome | blastn | 24600 | 444 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 17660801 | 17660801 | PRJNA415636_S_NODE_1314_length_375_cov_7.704268_g1267_i0 | PRJNA415636 | 1314 | 375 | 7.704268 | 28.891005 | Paenibacillus | 44249 | Bacteria | Bacteria | 52.8 | 0.036 | NTclustered | gi|1125819267|gb|CP011420.1| | 1406 | g1267 | i0 | 100 | 0.456 | 28 | 0 | 7 | 0 | 328 | 355 | 3149485 | 3149458 | Paenibacillus polymyxa strain ATCC 15970 chromosome, complete genome | blastn | 171 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus polymyxa | ||
| 18270736 | 18270736 | PRJNA415636_S_NODE_5335_length_222_cov_1.497143_g5288_i0 | PRJNA415636 | 5335 | 222 | 1.497143 | 3.32365746 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 361 | 2.8799999999999994e-95 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g5288 | i0 | 95.946 | 1 | 222 | 9 | 100 | 0 | 1 | 222 | 137419 | 137640 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 222 | 361 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 19544940 | 19544940 | PRJNA415636_S_NODE_4956_length_229_cov_1.197802_g4909_i0 | PRJNA415636 | 4956 | 229 | 1.197802 | 2.74296658 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 350 | 6.47e-92 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g4909 | i0 | 94.298 | 0.995633187772926 | 228 | 13 | 99 | 0 | 2 | 229 | 188922 | 188695 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 228 | 350 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 20820832 | 20820832 | PRJNA415636_S_NODE_3957_length_250_cov_1.502463_g3910_i0 | PRJNA415636 | 3957 | 250 | 1.502463 | 3.7561575 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 457 | 4.1099999999999985e-124 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g3910 | i0 | 99.6 | 1 | 250 | 1 | 100 | 0 | 1 | 250 | 37219 | 37468 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 250 | 457 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 20820834 | 20820834 | PRJNA415636_S_NODE_4197_length_244_cov_1.258883_g4150_i0 | PRJNA415636 | 4197 | 244 | 1.258883 | 3.07167452 | Corynebacterium sp. 102791.4 | 3104612 | Bacteria | Bacteria | 385 | 1.91e-102 | NTclustered | gi|2627812303|gb|OR912476.1| | 3104612 | g4150 | i0 | 95.082 | 335.463114754098 | 244 | 12 | 100 | 0 | 1 | 244 | 1164 | 921 | Corynebacterium sp. 102791.4 23S ribosomal RNA gene, partial sequence | blastn | 81853 | 385 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium sp. 102791.4 | ||
| 20820836 | 20820836 | PRJNA415636_S_NODE_5537_length_219_cov_1.186047_g5490_i0 | PRJNA415636 | 5537 | 219 | 1.186047 | 2.59744293 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 366 | 6.09e-97 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g5490 | i0 | 97.235 | 0.990867579908676 | 217 | 4 | 99 | 2 | 4 | 219 | 556495 | 556280 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 217 | 366 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 23371220 | 23371220 | PRJNA415636_S_NODE_2419_length_301_cov_3.610236_g2372_i0 | PRJNA415636 | 2419 | 301 | 3.610236 | 10.86681036 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 518 | 2.3e-142 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g2372 | i0 | 97.674 | 1 | 301 | 7 | 100 | 0 | 1 | 301 | 254865 | 254565 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 301 | 518 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 27612797 | 27612797 | PRJNA415636_S_NODE_5384_length_221_cov_2.086207_g5337_i0 | PRJNA415636 | 5384 | 221 | 2.086207 | 4.61051747 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 53.5 | 1.91e-6 | NR | MEY2477645.1 | 2900548 | g5337 | i0 | 42.3 | 1.91402714932127 | 71 | 41 | 96.4 | 0 | 214 | 2 | 78 | 148 | MEY2477645.1 hypothetical protein [Actinomycetota bacterium] | diamond | 423 | 53.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 27770744 | 27770744 | PRJNA415636_S_NODE_2104_length_318_cov_2.719557_g2057_i0 | PRJNA415636 | 2104 | 318 | 2.719557 | 8.64819126 | Phototrophicaceae bacterium | 3069543 | Bacteria | Bacteria | 93.6 | 4.22e-21 | NR | HEX2906967.1 | 3069543 | g2057 | i0 | 43.6 | 0.952830188679245 | 101 | 56 | 95.3 | 1 | 303 | 1 | 95 | 194 | HEX2906967.1 isoprenylcysteine carboxylmethyltransferase family protein [Phototrophicaceae bacterium] | diamond | 303 | 93.6 | 1 | Bacteria | Bacillati | Chloroflexota | Candidatus Thermofontia | Phototrophicales | Phototrophicaceae | Phototrophicaceae bacterium | |||
| 29854485 | 29854485 | PRJNA415636_S_NODE_4031_length_248_cov_2.273632_g3984_i0 | PRJNA415636 | 4031 | 248 | 2.273632 | 5.63860736 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 94 | 1.84e-20 | NR | WP_112665897.1 | 65123 | g3984 | i0 | 56.4 | 0.943548387096774 | 78 | 34 | 94.4 | 0 | 234 | 1 | 262 | 339 | WP_112665897.1 restriction endonuclease subunit S [Mycoplasma wenyonii] | diamond | 234 | 94 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 30265440 | 30265440 | PRJNA415636_S_NODE_3832_length_253_cov_1.800971_g3785_i0 | PRJNA415636 | 3832 | 253 | 1.800971 | 4.55645663 | Neobacillus cucumis | 1740721 | Bacteria | Bacteria | 111 | 1.81e-26 | NR | WP_180960453.1 | 1740721 | g3785 | i0 | 59.5 | 1.99209486166008 | 84 | 34 | 99.6 | 0 | 2 | 253 | 103 | 186 | WP_180960453.1 C39 family peptidase [Neobacillus cucumis] | diamond | 504 | 111 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Neobacillus | Neobacillus cucumis | ||
| 30517906 | 30517906 | PRJNA415636_S_NODE_3613_length_259_cov_0.995283_g3566_i0 | PRJNA415636 | 3613 | 259 | 0.995283 | 2.57778297 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 139 | 3.1500000000000004e-36 | NR | WP_112664927.1 | 65123 | g3566 | i0 | 81.4 | 0.996138996138996 | 86 | 16 | 99.6 | 0 | 259 | 2 | 133 | 218 | WP_112664927.1 DNA gyrase/topoisomerase IV subunit B [Mycoplasma wenyonii] | diamond | 258 | 139 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 31055321 | 31055321 | PRJNA415636_S_NODE_2755_length_287_cov_1.525000_g2708_i0 | PRJNA415636 | 2755 | 287 | 1.525 | 4.37675 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 73.2 | 5.52e-13 | NR | RAO95294.1 | 65123 | g2708 | i0 | 97.1 | 0.710801393728223 | 34 | 1 | 35.5 | 0 | 95 | 196 | 203 | 236 | RAO95294.1 modification methylase HemK [Mycoplasma wenyonii] | diamond | 204 | 73.2 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;