RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA415636", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 10 ✖

tax_clade 1

  • Sar · 10 ✖

bioproject 1

  • PRJNA415636 · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5522882 5522882 PRJNA415636_S_NODE_25_length_1226_cov_9.717557_g19_i0 PRJNA415636 25 1226 9.717557 119.13724882 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 1282 0   NTclustered gi|756877536|ref|NC_026310.1| 372086 g19 i0 85.692 11.3319738988581 1258 132 100 37 1 1226 105 1346 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 13893 1282 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
6796856 6796856 PRJNA415636_S_NODE_1026_length_404_cov_13.459384_g979_i0 PRJNA415636 1026 404 13.459384 54.37591136 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 375 2.0199999999999996e-99   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g979 i0 85.34 54.5 382 34 93 13 1 377 3675 4039 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 22018 375 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
13172879 13172879 PRJNA415636_S_NODE_131_length_794_cov_11.133869_g106_i0 PRJNA415636 131 794 11.133869 88.40291986 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 1018 0   NTclustered gi|756877536|ref|NC_026310.1| 372086 g106 i0 89.668 1.0919395465995 813 65 100 11 1 794 18440 17628 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 867 1018 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
13172885 13172885 PRJNA415636_S_NODE_631_length_473_cov_4.497653_g586_i0 PRJNA415636 631 473 4.497653 21.27389869 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 483 1.38e-131   NTclustered gi|756877536|ref|NC_026310.1| 372086 g586 i0 85.714 2.2093023255814 462 61 97 4 1 458 25679 25219 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 1045 483 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
15721781 15721781 PRJNA415636_S_NODE_5333_length_222_cov_1.674286_g5286_i0 PRJNA415636 5333 222 1.674286 3.71691492 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 405 1.31e-108   NTclustered gi|88792583|gb|DQ386164.1| 372086 g5286 i0 99.55 92.6126126126126 222 1 100 0 1 222 1609 1830 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 20560 405 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
19544932 19544932 PRJNA415636_S_NODE_256_length_636_cov_12.604414_g226_i0 PRJNA415636 256 636 12.604414 80.16407304 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 396 2.53e-105   NTclustered gi|756877536|ref|NC_026310.1| 372086 g226 i0 92.446 0.860062893081761 278 20 74 1 359 636 18795 19071 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 547 396 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
22095528 22095528 PRJNA415636_S_NODE_2998_length_278_cov_2.064935_g2951_i0 PRJNA415636 2998 278 2.064935 5.7405193 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 93.5 1.51e-14   NTclustered gi|302026200|gb|GQ377710.1| 323453 g2951 i0 79.412 0.784172661870504 136 24 48 4 14 147 152 285 Heteromita sp. PRA-74 40S ribosomal protein-like mRNA, partial sequence blastn 218 93.5 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
22760246 22760246 PRJNA415636_S_NODE_7598_length_176_cov_5.728682_g7551_i0 PRJNA415636 7598 176 5.728682 10.08248032 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 326 7.92e-85   NTclustered gi|33309627|gb|AF411270.1| 100933 g7551 i0 100 99.9375 176 0 100 0 1 176 1634 1459 Cercomonas longicauda 18S ribosomal RNA gene, complete sequence blastn 17589 326 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas longicauda
23371222 23371222 PRJNA415636_S_NODE_259_length_630_cov_9.656947_g229_i0 PRJNA415636 259 630 9.656947 60.8387661 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 837 0   NTclustered gi|756877536|ref|NC_026310.1| 372086 g229 i0 91.011 2.62539682539683 623 52 99 4 9 630 1988 1369 Paracercomonas marina strain ATCC 50344 mitochondrion, complete genome blastn 1654 837 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina
26917376 26917376 PRJNA415636_S_NODE_4522_length_237_cov_2.147368_g4475_i0 PRJNA415636 4522 237 2.147368 5.08926216 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 62.4 3.49e-9   NR YP_009118062.1 372086 g4475 i0 90.3 0.392405063291139 31 3 39.2 0 108 200 283 313 YP_009118062.1 NADH dehydrogenase subunit 1 [Paracercomonas marina] diamond 93 62.4 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;