RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA415636" and tax_clade = "Metamonada"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA415636 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30391991 30391991 PRJNA415636_S_NODE_5393_length_221_cov_1.218391_g5346_i0 PRJNA415636 5393 221 1.218391 2.69264411 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 46.6 0.00125   NR XP_067728054.1 2049356 g5346 i0 46.5 0.583710407239819 43 21 55.7 1 208 86 714 756 XP_067728054.1 uncharacterized protein MONOS_16490 [Monocercomonoides exilis] diamond 129 46.6 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31624132 31624132 PRJNA415636_S_NODE_2356_length_304_cov_1.466926_g2309_i0 PRJNA415636 2356 304 1.466926 4.45945504 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 94 4.7e-22   NR KAJ5071795.1 1746090 g2309 i0 44.6 0.996710526315789 101 54 98.7 2 5 304 35 134 KAJ5071795.1 phosphatidylglycerol/phosphatidylinositol transfer protein [Anaeramoeba ignava] diamond 303 94 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;