RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA414225", tax_kingdom = "Thermotogati" and tax_phylum = "Thermotogota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermotogota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA414225 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11286501 11286501 PRJNA414225_P_NODE_74989_length_164_cov_0.886957_g74902_i0 PRJNA414225 74989 164 0.886957 1.45460948 Fervidobacterium 2422 Bacteria Bacteria 303 3.42e-78   NTclustered gi|2793125101|gb|CP126499.1| 2423 g74902 i0 100 3 164 0 100 0 1 164 446429 446266 Fervidobacterium islandicum strain H-21 chromosome, complete genome blastn 492 303 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium islandicum
30833845 30833845 PRJNA414225_P_NODE_83754_length_162_cov_1.734513_g83667_i0 PRJNA414225 83754 162 1.734513 2.80991106 Fervidobacterium sp. 1871331 Bacteria Bacteria 105 1.07e-27   NR MDM7321096.1 1871331 g83667 i0 96.3 1 54 2 100 0 162 1 62 115 MDM7321096.1 hypothetical protein [Fervidobacterium sp.] diamond 162 105 1 Bacteria   Thermotogati Thermotogota Thermotogae Thermotogales Fervidobacteriaceae Fervidobacterium Fervidobacterium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;