contig_metadata
12 rows where bioproject = "PRJNA414225", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2969603 | 2969603 | PRJNA414225_P_NODE_13863_length_195_cov_1.150685_g13776_i0 | PRJNA414225 | 13863 | 195 | 1.150685 | 2.24383575 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 279 | 7.1e-71 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g13776 | i0 | 93.158 | 137.928205128205 | 190 | 13 | 97 | 0 | 5 | 194 | 3942073 | 3942262 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 26896 | 279 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 5522713 | 5522713 | PRJNA414225_P_NODE_44745_length_168_cov_1.714286_g44658_i0 | PRJNA414225 | 44745 | 168 | 1.714286 | 2.88000048 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 111 | 2.3e-20 | NTclustered | gi|2621786039|emb|OY782497.1| | 2818507 | g44658 | i0 | 79.503 | 7.82142857142857 | 161 | 29 | 95 | 4 | 7 | 165 | 3395553 | 3395395 | MAG: Myxococcota bacterium isolate 0c961c99-2a7e-4543-b017-306f11f6fc1d genome assembly, chromosome: 1 | blastn | 1314 | 111 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 9347136 | 9347136 | PRJNA414225_P_NODE_78568_length_163_cov_0.894737_g78481_i0 | PRJNA414225 | 78568 | 163 | 0.894737 | 1.45842131 | Archangium gephyra | 48 | Bacteria | Bacteria | 148 | 1.68e-31 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g78481 | i0 | 85.417 | 91.4233128834356 | 144 | 19 | 88 | 2 | 21 | 163 | 5895145 | 5895287 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 14902 | 148 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 18934635 | 18934635 | PRJNA414225_P_NODE_65155_length_165_cov_0.879310_g65068_i0 | PRJNA414225 | 65155 | 165 | 0.87931 | 1.4508615 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 57.8 | 6.13e-8 | NR | MBI4515129.1 | 2026735 | g65068 | i0 | 62.3 | 0.963636363636364 | 53 | 20 | 96.4 | 0 | 2 | 160 | 254 | 306 | MBI4515129.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 159 | 57.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 26726987 | 26726987 | PRJNA414225_P_NODE_56481_length_166_cov_0.871795_g56394_i0 | PRJNA414225 | 56481 | 166 | 0.871795 | 1.4471797 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 86.7 | 2.67e-20 | NR | MCA9640749.1 | 2026763 | g56394 | i0 | 83.3 | 0.975903614457831 | 54 | 9 | 97.6 | 0 | 2 | 163 | 58 | 111 | MCA9640749.1 hypothetical protein [Myxococcales bacterium] | diamond | 162 | 86.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 26726991 | 26726991 | PRJNA414225_P_NODE_86761_length_162_cov_0.902655_g86674_i0 | PRJNA414225 | 86761 | 162 | 0.902655 | 1.4623011 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 94.4 | 8.050000000000001e-21 | NR | GMU63075.1 | 2484252 | g86674 | i0 | 92.5 | 9.81481481481481 | 53 | 4 | 98.1 | 0 | 2 | 160 | 612 | 664 | GMU63075.1 MAG: hypothetical protein AMXMBFR34_48380 [Myxococcaceae bacterium] | diamond | 1590 | 94.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 27391790 | 27391790 | PRJNA414225_P_NODE_16223_length_191_cov_1.084507_g16136_i0 | PRJNA414225 | 16223 | 191 | 1.084507 | 2.07140837 | Anaeromyxobacter terrae | 2925406 | Bacteria | Bacteria | 50.4 | 3.47e-5 | NR | WP_242344762.1 | 2925406 | g16136 | i0 | 51.8 | 0.879581151832461 | 56 | 27 | 88 | 0 | 178 | 11 | 132 | 187 | WP_242344762.1 EpsG family protein [Anaeromyxobacter terrae] | diamond | 168 | 50.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter terrae | ||
| 27565989 | 27565989 | PRJNA414225_P_NODE_24684_length_183_cov_1.522388_g24597_i0 | PRJNA414225 | 24684 | 183 | 1.522388 | 2.78597004 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 50.8 | 2.38e-5 | NR | MBN8535434.1 | 2026735 | g24597 | i0 | 73.3 | 0.983606557377049 | 30 | 8 | 49.2 | 0 | 90 | 1 | 1 | 30 | MBN8535434.1 ABC transporter ATP-binding protein [Deltaproteobacteria bacterium] | diamond | 180 | 50.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27770743 | 27770743 | PRJNA414225_P_NODE_90164_length_159_cov_2.572727_g90077_i0 | PRJNA414225 | 90164 | 159 | 2.572727 | 4.09063593 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 74.3 | 1.91e-14 | NR | MBL9025069.1 | 2026763 | g90077 | i0 | 60.8 | 0.962264150943396 | 51 | 20 | 96.2 | 0 | 158 | 6 | 171 | 221 | MBL9025069.1 carotenoid synthesis regulator CarF [Myxococcales bacterium] | diamond | 153 | 74.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28307299 | 28307299 | PRJNA414225_P_NODE_60366_length_166_cov_0.871795_g60279_i0 | PRJNA414225 | 60366 | 166 | 0.871795 | 1.4471797 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 94.4 | 8.42e-21 | NR | HSI04277.1 | 2818507 | g60279 | i0 | 83.3 | 1.73493975903614 | 48 | 8 | 86.7 | 0 | 146 | 3 | 643 | 690 | HSI04277.1 PilC/PilY family type IV pilus protein [Myxococcota bacterium] | diamond | 288 | 94.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 29601500 | 29601500 | PRJNA414225_P_NODE_36810_length_174_cov_1.456000_g36723_i0 | PRJNA414225 | 36810 | 174 | 1.456 | 2.53344 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 73.2 | 2.68e-13 | NR | MDP2341952.1 | 2026735 | g36723 | i0 | 72.7 | 0.948275862068966 | 55 | 15 | 94.8 | 0 | 166 | 2 | 150 | 204 | MDP2341952.1 GAF domain-containing protein [Deltaproteobacteria bacterium] | diamond | 165 | 73.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30328853 | 30328853 | PRJNA414225_P_NODE_74272_length_164_cov_0.886957_g74185_i0 | PRJNA414225 | 74272 | 164 | 0.886957 | 1.45460948 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 84.7 | 2.62e-18 | NR | MDH3519357.1 | 2026763 | g74185 | i0 | 77.4 | 0.969512195121951 | 53 | 12 | 97 | 0 | 4 | 162 | 37 | 89 | MDH3519357.1 endonuclease III [Myxococcales bacterium] | diamond | 159 | 84.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;