RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA414225", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA414225 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30439934 30439934 PRJNA414225_P_NODE_71153_length_164_cov_0.886957_g71066_i0 PRJNA414225 71153 164 0.886957 1.45460948 Bacillati 1783272 Bacteria Bacteria 57.4 4.33e-8   NR RJP46946.1 2033014 g71066 i0 40.7 3.96951219512195 54 32 98.8 0 3 164 13 66 RJP46946.1 MAG: DUF4145 domain-containing protein [Armatimonadota bacterium] diamond 651 57.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30724064 30724064 PRJNA414225_P_NODE_35874_length_174_cov_2.104000_g35787_i0 PRJNA414225 35874 174 2.104 3.66096 Bacteria 2 Bacteria Bacteria 109 3.03e-27   NR MER3466176.1 2033014 g35787 i0 89.5 1.96551724137931 57 6 98.3 0 3 173 35 91 MER3466176.1 hypothetical protein [Armatimonadota bacterium] diamond 342 109 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;