RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA414225" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA414225 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27549400 27549400 PRJNA414225_P_NODE_13104_length_198_cov_1.020134_g13017_i0 PRJNA414225 13104 198 1.020134 2.01986532 Methanoculleus sp. 90427 Archaea Archaea 93.2 3.07e-20   NR WP_292559315.1 90427 g13017 i0 72.7 0.833333333333333 55 15 83.3 0 198 34 354 408 WP_292559315.1 hypothetical protein [Methanoculleus sp.] diamond 165 93.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
27896704 27896704 PRJNA414225_P_NODE_42085_length_170_cov_1.685950_g41998_i0 PRJNA414225 42085 170 1.68595 2.866115 Methanothrix sp. 90426 Archaea Archaea 76.3 1.33e-14   NR HOO54542.1 90426 g41998 i0 71.4 0.988235294117647 56 15 98.8 1 3 170 47 101 HOO54542.1 endonuclease/exonuclease/phosphatase family protein [Methanothrix sp.] diamond 168 76.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
31972102 31972102 PRJNA414225_P_NODE_65078_length_165_cov_0.879310_g64991_i0 PRJNA414225 65078 165 0.87931 1.4508615 Methanofastidiosum sp. 2666341 Archaea Archaea 123 3.0000000000000003e-31   NR MBP6933165.1 2666341 g64991 i0 100 1 55 0 100 0 165 1 352 406 MBP6933165.1 RagB/SusD family nutrient uptake outer membrane protein [Methanofastidiosum sp.] diamond 165 123 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;