RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA414225", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA414225 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4245930 4245930 PRJNA414225_P_NODE_10224_length_210_cov_1.105590_g10137_i0 PRJNA414225 10224 210 1.10559 2.321739 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 289 1.29e-73   NTclustered gi|820695469|tpe|LN714488.1| 572307 g10137 i0 92.965 25.4714285714286 199 12 94 2 14 210 302112 302310 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 5349 289 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4911236 4911236 PRJNA414225_P_NODE_75864_length_163_cov_2.149123_g75777_i0 PRJNA414225 75864 163 2.149123 3.50307049 root 1 Root_unresolved Root_unresolved 291 2.64e-74   NTclustered gi|833494852|ref|XM_012915026.1| 5866 g75777 i0 98.773 96.9877300613497 163 2 100 0 1 163 273 111 Babesia bigemina hypothetical protein, conserved partial mRNA blastn 15809 291 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
10622902 10622902 PRJNA414225_P_NODE_81429_length_163_cov_0.894737_g81342_i0 PRJNA414225 81429 163 0.894737 1.45842131 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 239 9.72e-59   NTclustered gi|820695469|tpe|LN714488.1| 572307 g81342 i0 95.364 3.87730061349693 151 6 92 1 1 150 157473 157323 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 632 239 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
10622926 10622926 PRJNA414225_P_NODE_8989_length_216_cov_0.814371_g8902_i0 PRJNA414225 8989 216 0.814371 1.75904136 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 281 2.23e-71   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8902 i0 90.278 71.1898148148148 216 20 99 1 2 216 116677 116892 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 15377 281 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
11897792 11897792 PRJNA414225_P_NODE_5210_length_241_cov_1.270833_g5123_i0 PRJNA414225 5210 241 1.270833 3.06270753 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 220 5.62e-53   NTclustered gi|820695469|tpe|LN714488.1| 572307 g5123 i0 91.772 33.9294605809129 158 13 98 0 1 158 302521 302678 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8177 220 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14447770 14447770 PRJNA414225_P_NODE_2492_length_287_cov_0.794118_g2405_i0 PRJNA414225 2492 287 0.794118 2.27911866 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 420 6.31e-113   NTclustered gi|820695469|tpe|LN714488.1| 572307 g2405 i0 93.31 36.7560975609756 284 19 100 0 4 287 116445 116162 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 10549 420 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27440136 27440136 PRJNA414225_P_NODE_84163_length_162_cov_1.318584_g84076_i0 PRJNA414225 84163 162 1.318584 2.13610608 root 1 Root_unresolved Root_unresolved 48.9 2.18e-5   NR XP_664835.1 353151 g84076 i0 66 1.74074074074074 47 16 87 0 20 160 72 118 XP_664835.1 LacOPZ-alpha peptide from pUC9 [Cryptosporidium hominis TU502] diamond 282 48.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;