RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA414225", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Rotifera · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA414225 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22760184 22760184 PRJNA414225_P_NODE_73138_length_164_cov_0.886957_g73051_i0 PRJNA414225 73138 164 0.886957 1.45460948 Metazoa 33208 Rotifera other_Eukaryota 287 3.45e-73   NTclustered gi|37785582|gb|AY210469.1| 96448 g73051 i0 98.171 79.6219512195122 164 3 100 0 1 164 2296 2133 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 13058 287 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
27043955 27043955 PRJNA414225_P_NODE_68102_length_165_cov_0.879310_g68015_i0 PRJNA414225 68102 165 0.87931 1.4508615 Adineta steineri 433720 Rotifera other_Eukaryota 52 9.56e-7   NR CAF4129484.1 433720 g68015 i0 46.2 0.945454545454545 52 27 94.5 1 157 2 7 57 CAF4129484.1 unnamed protein product [Adineta steineri] diamond 156 52 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri
28545167 28545167 PRJNA414225_P_NODE_13127_length_198_cov_1.013423_g13040_i0 PRJNA414225 13127 198 1.013423 2.00657754 root 1 Root_unresolved Root_unresolved 92 7.19e-20   NR UJR28077.1 104782 g13040 i0 70.3 8.72727272727273 64 17 97 1 196 5 128 189 UJR28077.1 hypothetical protein I4U23_009333 [Adineta vaga] diamond 1728 92 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;