RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA414225", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA414225 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27913264 27913264 PRJNA414225_P_NODE_67945_length_165_cov_0.879310_g67858_i0 PRJNA414225 67945 165 0.87931 1.4508615 Pseudomonadati 3379134 Bacteria Bacteria 46.6 1.02e-4   NR WP_282010452.1 1323948 g67858 i0 51.4 2.96363636363636 37 18 67.3 0 41 151 45 81 WP_282010452.1 ribbon-helix-helix domain-containing protein [Nitrospina watsonii] diamond 489 47 0.991489361702128 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Nitrospina Nitrospina watsonii
30802216 30802216 PRJNA414225_P_NODE_60814_length_166_cov_0.871795_g60727_i0 PRJNA414225 60814 166 0.871795 1.4471797 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 41.6 0.0349   NR MBI3025112.1 2528274 g60727 i0 36.5 0.939759036144578 52 32 92.2 1 160 8 708 759 MBI3025112.1 efflux RND transporter permease subunit [Candidatus Tectimicrobiota bacterium] diamond 156 41.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;