RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

23 rows where bioproject = "PRJNA414225" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 23 ✖

bioproject 1

  • PRJNA414225 · 23 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4911149 4911149 PRJNA414225_P_NODE_3844_length_257_cov_1.706731_g3757_i0 PRJNA414225 3844 257 1.706731 4.38629867 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 147 1.04e-30   NTclustered gi|2414483|emb|Y00055.1| 5656 g3757 i0 97.647 48.1089494163424 85 2 33 0 170 254 8063 8147 Crithidia fasciculata ribosomal DNA repeat (complete) blastn 12364 147 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Crithidia Crithidia fasciculata
5522757 5522757 PRJNA414225_P_NODE_69205_length_164_cov_1.773913_g69118_i0 PRJNA414225 69205 164 1.773913 2.90921732 Paratrypanosoma confusum 1470209 Euglenozoa other_Eukaryota 102 7.169999999999998e-24   NR AGG11412.1 1470209 g69118 i0 92.6 1.97560975609756 54 4 98.8 0 164 3 205 258 AGG11412.1 hypothetical protein, partial [Paratrypanosoma confusum] diamond 324 102 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Paratrypanosoma Paratrypanosoma confusum
10622782 10622782 PRJNA414225_P_NODE_28909_length_180_cov_1.358779_g28822_i0 PRJNA414225 28909 180 1.358779 2.4458022 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 261 2.33e-65   NTclustered gi|2031940963|emb|OD957789.1| 5763 g28822 i0 92.778 2.62777777777778 180 13 100 0 1 180 148 327 Naegleria fowleri Karachi_NF001 strain blastn 473 261 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
10622846 10622846 PRJNA414225_P_NODE_61229_length_165_cov_2.103448_g61142_i0 PRJNA414225 61229 165 2.103448 3.4706892 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 222 9.939999999999999e-54   NTclustered gi|686646785|ref|XM_009317563.1| 71804 g61142 i0 90.909 104.963636363636 165 15 100 0 1 165 324 160 Trypanosoma grayi calmodulin partial mRNA blastn 17319 222 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
16996307 16996307 PRJNA414225_P_NODE_10994_length_206_cov_1.949045_g10907_i0 PRJNA414225 10994 206 1.949045 4.0150327 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 370 4.38e-98   NTclustered gi|2031941502|emb|OD957913.1| 5763 g10907 i0 99.029 1 206 2 100 0 1 206 155 360 Naegleria fowleri Karachi_NF001 strain blastn 206 370 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
18270483 18270483 PRJNA414225_P_NODE_13815_length_195_cov_1.397260_g13728_i0 PRJNA414225 13815 195 1.39726 2.724657 Andalucia godoyi 505711 Root_unresolved Root_unresolved 226 9.379999999999996e-55   NTclustered gi|484759855|ref|NC_021124.1| 505711 g13728 i0 89.56 183.492307692308 182 14 92 4 4 183 695 873 Andalucia godoyi strain ATCC PRA-185 mitochondrion, complete genome blastn 35781 226 1 Eukaryota Discoba       Jakobida Andaluciidae Andalucia Andalucia godoyi
18270540 18270540 PRJNA414225_P_NODE_41415_length_171_cov_1.229508_g41328_i0 PRJNA414225 41415 171 1.229508 2.10245868 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 99.4 3.549999999999999e-23   NR KPI82475.1 5684 g41328 i0 88.7 1.91228070175439 53 6 93 0 11 169 64 116 KPI82475.1 methionine adenosyltransferase [Leptomonas seymouri] diamond 327 99.8 0.995991983967936 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas seymouri
26885921 26885921 PRJNA414225_P_NODE_28341_length_180_cov_1.557252_g28254_i0 PRJNA414225 28341 180 1.557252 2.8030536 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 63.9 5.43e-10   NR EPY35056.1 28005 g28254 i0 40 1 60 36 100 0 1 180 126 185 EPY35056.1 hypothetical protein STCU_01272 [Strigomonas culicis] diamond 180 63.9 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
27043951 27043951 PRJNA414225_P_NODE_47762_length_167_cov_0.872881_g47675_i0 PRJNA414225 47762 167 0.872881 1.45771127 Trypanosoma equiperdum 5694 Euglenozoa other_Eukaryota 95.1 4.6200000000000005e-21   NR XP_067079381.1 5694 g47675 i0 78.2 8.89221556886227 55 12 98.8 0 166 2 476 530 XP_067079381.1 adenylosuccinate synthetase, putative [Trypanosoma equiperdum] diamond 1485 95.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
27060589 27060589 PRJNA414225_P_NODE_18282_length_189_cov_1.292857_g18195_i0 PRJNA414225 18282 189 1.292857 2.44349973 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 109 1.17e-27   NR EKF99908.1 5693 g18195 i0 82.5 14 63 11 100 0 1 189 97 159 EKF99908.1 60S ribosomal protein L7, putative [Trypanosoma cruzi] diamond 2646 110 0.990909090909091 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
27265293 27265293 PRJNA414225_P_NODE_15863_length_191_cov_1.436620_g15776_i0 PRJNA414225 15863 191 1.43662 2.7439442 Bodo saltans 75058 Euglenozoa other_Eukaryota 83.2 9.989999999999999e-17   NR CUG89085.1 75058 g15776 i0 58.1 0.973821989528796 62 26 97.4 0 190 5 190 251 CUG89085.1 trypsin peptidase, putative [Bodo saltans] diamond 186 83.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27440135 27440135 PRJNA414225_P_NODE_54323_length_166_cov_1.743590_g54236_i0 PRJNA414225 54323 166 1.74359 2.8943594 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.1 3.42e-5   NR XP_044560238.1 5763 g54236 i0 53.8 3.48795180722892 39 18 70.5 0 11 127 183 221 XP_044560238.1 uncharacterized protein FDP41_005519 [Naegleria fowleri] diamond 579 50.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27471542 27471542 PRJNA414225_P_NODE_86763_length_162_cov_0.902655_g86676_i0 PRJNA414225 86763 162 0.902655 1.4623011 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 62 3.02e-10   NR ESL05514.1 429131 g86676 i0 56 5.25925925925926 50 22 92.6 0 11 160 22 71 ESL05514.1 serine/threonine-protein kinase A [Trypanosoma rangeli SC58] diamond 852 62 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
30328850 30328850 PRJNA414225_P_NODE_48572_length_167_cov_0.864407_g48485_i0 PRJNA414225 48572 167 0.864407 1.44355969 Bodo saltans 75058 Euglenozoa other_Eukaryota 67 3.16e-11   NR CUE69662.1 75058 g48485 i0 73.8 5.67664670658683 42 11 75.4 0 136 11 86 127 CUE69662.1 UDP-sugar transporter, putative [Bodo saltans] diamond 948 67 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30471509 30471509 PRJNA414225_P_NODE_41673_length_170_cov_2.099174_g41586_i0 PRJNA414225 41673 170 2.099174 3.5685958 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.9 1.58e-6   NR CUG90566.1 75058 g41586 i0 47.9 4.21764705882353 48 25 84.7 0 24 167 452 499 CUG90566.1 transmembrane protein, putative, partial [Bodo saltans] diamond 717 54.3 0.992633517495396 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30644116 30644116 PRJNA414225_P_NODE_44193_length_169_cov_1.350000_g44106_i0 PRJNA414225 44193 169 1.35 2.2815 Bodo saltans 75058 Euglenozoa other_Eukaryota 57.8 1.07e-8   NR CUG88639.1 75058 g44106 i0 45.1 0.905325443786982 51 28 90.5 0 159 7 2 52 CUG88639.1 cofilin actin depolymerizing factor, putative [Bodo saltans] diamond 153 57.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30802214 30802214 PRJNA414225_P_NODE_48254_length_167_cov_0.864407_g48167_i0 PRJNA414225 48254 167 0.864407 1.44355969 Leishmania sp. Namibia 2802991 Euglenozoa other_Eukaryota 76.3 4.72e-15   NR XP_067705119.1 2802991 g48167 i0 70.8 0.862275449101796 48 14 86.2 0 145 2 87 134 XP_067705119.1 hypothetical protein JIQ42_00765 [Leishmania sp. Namibia] diamond 144 76.3 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
30865370 30865370 PRJNA414225_P_NODE_63874_length_165_cov_0.879310_g63787_i0 PRJNA414225 63874 165 0.87931 1.4508615 Bodo saltans 75058 Euglenozoa other_Eukaryota 77 8.75e-15   NR CUI14424.1 75058 g63787 i0 73.6 0.963636363636364 53 14 96.4 0 159 1 222 274 CUI14424.1 UV excision repair RAD23-like protein, putative [Bodo saltans] diamond 159 77 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
31324472 31324472 PRJNA414225_P_NODE_52555_length_167_cov_0.864407_g52468_i0 PRJNA414225 52555 167 0.864407 1.44355969 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 65.5 1.18e-10   NR EPY32075.1 59799 g52468 i0 58 4.61676646706587 50 21 89.8 0 1 150 146 195 EPY32075.1 translation initiation factor 4A [Angomonas deanei] diamond 771 65.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Angomonas Angomonas deanei
31908872 31908872 PRJNA414225_P_NODE_40797_length_171_cov_1.672131_g40710_i0 PRJNA414225 40797 171 1.672131 2.85934401 Bodo saltans 75058 Euglenozoa other_Eukaryota 50.1 3.61e-5   NR CUE71439.1 75058 g40710 i0 33 1.54385964912281 88 26 96.5 1 169 5 115 202 CUE71439.1 Hypothetical protein, putative [Bodo saltans] diamond 264 50.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32035427 32035427 PRJNA414225_P_NODE_26538_length_182_cov_1.390977_g26451_i0 PRJNA414225 26538 182 1.390977 2.53157814 Bodo saltans 75058 Euglenozoa other_Eukaryota 84 1.65e-17   NR CUG86193.1 75058 g26451 i0 72.9 1.94505494505495 59 16 97.3 0 179 3 165 223 CUG86193.1 Hypothetical protein, putative, partial [Bodo saltans] diamond 354 84 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32130546 32130546 PRJNA414225_P_NODE_41218_length_171_cov_1.377049_g41131_i0 PRJNA414225 41218 171 1.377049 2.35475379 Trypanosoma equiperdum 5694 Euglenozoa other_Eukaryota 52.8 4.24e-6   NR XP_067077291.1 5694 g41131 i0 43.4 0.929824561403509 53 27 93 1 1 159 7 56 XP_067077291.1 uncharacterized protein TEOVI_000688500 [Trypanosoma equiperdum] diamond 159 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma equiperdum
32288946 32288946 PRJNA414225_P_NODE_76219_length_163_cov_1.789474_g76132_i0 PRJNA414225 76219 163 1.789474 2.91684262 Trypanosoma vivax 5699 Euglenozoa other_Eukaryota 103 4.78e-24   NR KAG8345828.1 5699 g76132 i0 88.9 3.97546012269939 54 6 99.4 0 162 1 240 293 KAG8345828.1 putative ribonucleoside-diphosphate reductase large chain [Trypanosoma vivax] diamond 648 103 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;