RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA414225", tax_clade = "Caldisericota/Cryosericota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Caldisericota/Cryosericota group · 2 ✖

bioproject 1

  • PRJNA414225 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29632993 29632993 PRJNA414225_P_NODE_84070_length_162_cov_1.362832_g83983_i0 PRJNA414225 84070 162 1.362832 2.20778784 Caldisericum sp. AR60 3397852 Bacteria Bacteria 90.5 1.71e-19   NR WP_416085255.1 3397852 g83983 i0 72.2 1 54 15 100 0 162 1 161 214 WP_416085255.1 zinc ribbon domain-containing protein [Caldisericum sp. AR60] diamond 162 90.5 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia Caldisericales Caldisericaceae Caldisericum Caldisericum sp. AR60
30707413 30707413 PRJNA414225_P_NODE_15254_length_192_cov_1.195804_g15167_i0 PRJNA414225 15254 192 1.195804 2.29594368 Caldisericum sp. AR60 3397852 Bacteria Bacteria 92 7.06e-20   NR WP_416085255.1 3397852 g15167 i0 71.4 1.96875 63 18 98.4 0 2 190 394 456 WP_416085255.1 zinc ribbon domain-containing protein [Caldisericum sp. AR60] diamond 378 92 1 Bacteria Caldisericota/Cryosericota group Pseudomonadati Caldisericota Caldisericia Caldisericales Caldisericaceae Caldisericum Caldisericum sp. AR60

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;