RNAquarium Metadata Server
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contig_metadata

28 rows where bioproject = "PRJNA414036" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA414036 · 28 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26743622 26743622 PRJNA414036_P_NODE_18461_length_350_cov_2.257143_g16742_i0 PRJNA414036 18461 350 2.257143 7.9000005 Opisthokonta 33154 Rotifera other_Eukaryota 72.8 1.63e-12   NR AGH55787.1 104777 g16742 i0 45 9.51428571428571 111 61 95.1 0 340 8 119 229 AGH55787.1 Rad51, partial [Brachionus calyciflorus] diamond 3330 72.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
27123475 27123475 PRJNA414036_P_NODE_23282_length_314_cov_5.505376_g21551_i0 PRJNA414036 23282 314 5.505376 17.28688064 Metazoa 33208 Rotifera other_Eukaryota 53.5 1.32e-5   NR UJR24951.1 104782 g21551 i0 65.1 89.5796178343949 43 15 41.1 0 146 18 40 82 UJR24951.1 hypothetical protein I4U23_006315 [Adineta vaga] diamond 28128 53.9 0.992578849721707 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
27138328 27138328 PRJNA414036_P_NODE_13642_length_394_cov_4.696379_g11995_i0 PRJNA414036 13642 394 4.696379 18.50373326 Brachionus plicatilis 10195 Rotifera other_Eukaryota 54.3 1.71e-5   NR RNA24403.1 10195 g11995 i0 26.6 0.974619289340102 128 90 95.2 2 392 18 260 386 RNA24403.1 hypothetical protein BpHYR1_020999 [Brachionus plicatilis] diamond 384 54.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27408503 27408503 PRJNA414036_P_NODE_65283_length_197_cov_2.641975_g63544_i0 PRJNA414036 65283 197 2.641975 5.20469075 Eurotatoria 2816136 Rotifera other_Eukaryota 74.3 1.27e-13   NR CAF0922475.1 249248 g63544 i0 58.1 9.44162436548223 62 26 94.4 0 3 188 131 192 CAF0922475.1 unnamed protein product [Adineta ricciae] diamond 1860 74.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27580999 27580999 PRJNA414036_P_NODE_68464_length_187_cov_16.263158_g66725_i0 PRJNA414036 68464 187 16.263158 30.41210546 Brachionus plicatilis 10195 Rotifera other_Eukaryota 43.9 0.00311   NR RNA19465.1 10195 g66725 i0 57.8 6.49732620320856 45 19 72.2 0 137 3 17 61 RNA19465.1 histone [Brachionus plicatilis] diamond 1215 43.9 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27707818 27707818 PRJNA414036_P_NODE_21784_length_324_cov_5.792388_g20056_i0 PRJNA414036 21784 324 5.792388 18.76733712 Brachionus plicatilis 10195 Rotifera other_Eukaryota 70.1 8.81e-12   NR RNA23535.1 10195 g20056 i0 51.2 0.759259259259259 82 40 75.9 0 8 253 41 122 RNA23535.1 hypothetical protein BpHYR1_030776 [Brachionus plicatilis] diamond 246 70.1 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27818904 27818904 PRJNA414036_P_NODE_31364_length_267_cov_4.767241_g29628_i0 PRJNA414036 31364 267 4.767241 12.72853347 Metazoa 33208 Rotifera other_Eukaryota 82.4 5.61e-16   NR RNA42793.1 10195 g29628 i0 64.5 64.7865168539326 62 22 69.7 0 80 265 1677 1738 RNA42793.1 pre-mRNA-processing-splicing factor 8, partial [Brachionus plicatilis] diamond 17298 82.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
27959911 27959911 PRJNA414036_P_NODE_70825_length_181_cov_3.321918_g69086_i0 PRJNA414036 70825 181 3.321918 6.01267158 Brachionus plicatilis 10195 Rotifera other_Eukaryota 57.8 6.54e-9   NR RNA30810.1 10195 g69086 i0 65.9 0.729281767955801 44 15 72.9 0 3 134 14 57 RNA30810.1 hypothetical protein BpHYR1_015557 [Brachionus plicatilis] diamond 132 57.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28039808 28039808 PRJNA414036_P_NODE_31365_length_267_cov_4.762931_g29629_i0 PRJNA414036 31365 267 4.762931 12.71702577 Philodinidae 44580 Rotifera other_Eukaryota 49.7 1.73e-4   NR CAF1643383.1 392030 g29629 i0 61.8 46.2359550561798 34 13 38.2 0 150 251 401 434 CAF1643383.1 unnamed protein product [Rotaria magnacalcarata] diamond 12345 49.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
28749316 28749316 PRJNA414036_P_NODE_18307_length_351_cov_3.373418_g16590_i0 PRJNA414036 18307 351 3.373418 11.84069718 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 41.2 0.049   NR CAF4294759.1 392030 g16590 i0 58.1 0.264957264957265 31 13 26.5 0 259 167 16 46 CAF4294759.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 93 41.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
28749317 28749317 PRJNA414036_P_NODE_23547_length_312_cov_12.592058_g21816_i0 PRJNA414036 23547 312 12.592058 39.28722096 Brachionus plicatilis 10195 Rotifera other_Eukaryota 84.7 1.74e-17   NR RNA00284.1 10195 g21816 i0 60 0.673076923076923 70 28 67.3 0 103 312 99 168 RNA00284.1 beta [Brachionus plicatilis] diamond 210 84.7 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28749326 28749326 PRJNA414036_P_NODE_88447_length_151_cov_1.775862_g86708_i0 PRJNA414036 88447 151 1.775862 2.68155162 Brachionus plicatilis 10195 Rotifera other_Eukaryota 39.3 0.042   NR RNA18174.1 10195 g86708 i0 53.5 0.854304635761589 43 20 85.4 0 133 5 4 46 RNA18174.1 hypothetical protein BpHYR1_028332 [Brachionus plicatilis] diamond 129 39.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28938877 28938877 PRJNA414036_P_NODE_77448_length_167_cov_2.969697_g75709_i0 PRJNA414036 77448 167 2.969697 4.95939399 Brachionus plicatilis 10195 Rotifera other_Eukaryota 64.3 3.94e-11   NR RNA22293.1 10195 g75709 i0 51.9 0.934131736526946 52 25 93.4 0 160 5 86 137 RNA22293.1 hypothetical protein BpHYR1_026734 [Brachionus plicatilis] diamond 156 64.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
28970375 28970375 PRJNA414036_P_NODE_22488_length_319_cov_19.838028_g20757_i0 PRJNA414036 22488 319 19.838028 63.28330932 Brachionus plicatilis 10195 Rotifera other_Eukaryota 82.8 1.02e-16   NR RNA00284.1 10195 g20757 i0 59.5 0.789968652037618 84 34 79 0 253 2 97 180 RNA00284.1 beta [Brachionus plicatilis] diamond 252 82.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29475198 29475198 PRJNA414036_P_NODE_14110_length_390_cov_1.698592_g12449_i0 PRJNA414036 14110 390 1.698592 6.6245088 Brachionus plicatilis 10195 Rotifera other_Eukaryota 45.8 0.00816   NR RNA23263.1 10195 g12449 i0 32.1 0.646153846153846 84 57 64.6 0 263 12 1 84 RNA23263.1 hypothetical protein BpHYR1_033062 [Brachionus plicatilis] diamond 252 45.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29618096 29618096 PRJNA414036_P_NODE_89370_length_150_cov_1.660870_g87631_i0 PRJNA414036 89370 150 1.66087 2.491305 Rotaria 231623 Rotifera other_Eukaryota 41.2 0.0368   NR CAF4148047.1 392032 g87631 i0 53.7 4.96 41 19 82 0 14 136 2807 2847 CAF4148047.1 unnamed protein product [Rotaria socialis] diamond 744 41.6 0.990384615384615 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria socialis
29759523 29759523 PRJNA414036_P_NODE_13731_length_393_cov_10.198324_g12080_i0 PRJNA414036 13731 393 10.198324 40.07941332 Brachionus plicatilis 10195 Rotifera other_Eukaryota 52 8.08e-5   NR RNA29565.1 10195 g12080 i0 48.5 0.519083969465649 68 32 49.6 1 320 126 197 264 RNA29565.1 hypothetical protein BpHYR1_041898 [Brachionus plicatilis] diamond 204 52 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29902759 29902759 PRJNA414036_P_NODE_74251_length_173_cov_5.144928_g72512_i0 PRJNA414036 74251 173 5.144928 8.90072544 Opisthokonta 33154 Rotifera other_Eukaryota 46.2 8.81e-4   NR RNA42793.1 10195 g72512 i0 55.4 12.6242774566474 56 25 97.1 0 6 173 1363 1418 RNA42793.1 pre-mRNA-processing-splicing factor 8, partial [Brachionus plicatilis] diamond 2184 46.6 0.991416309012876 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
29917735 29917735 PRJNA414036_P_NODE_8411_length_457_cov_6.040284_g7040_i0 PRJNA414036 8411 457 6.040284 27.60409788 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 66.2 1.37e-9   NR CAF4593571.1 2762512 g7040 i0 45.5 7.61487964989059 99 54 65 0 451 155 33 131 CAF4593571.1 unnamed protein product, partial [Rotaria sp. Silwood2] diamond 3480 66.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
30075433 30075433 PRJNA414036_P_NODE_34072_length_255_cov_1.704545_g32336_i0 PRJNA414036 34072 255 1.704545 4.34658975 Rotaria magnacalcarata 392030 Rotifera other_Eukaryota 41.2 0.0394   NR CAF5229573.1 392030 g32336 i0 79.3 0.341176470588235 29 6 34.1 0 96 10 14 42 CAF5229573.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 87 41.2 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
30265431 30265431 PRJNA414036_P_NODE_75232_length_171_cov_3.220588_g73493_i0 PRJNA414036 75232 171 3.220588 5.50720548 Brachionus plicatilis 10195 Rotifera other_Eukaryota 45.4 0.00146   NR RNA23264.1 10195 g73493 i0 54.7 0.929824561403509 53 24 93 0 7 165 153 205 RNA23264.1 hypothetical protein BpHYR1_033063 [Brachionus plicatilis] diamond 159 45.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30580861 30580861 PRJNA414036_P_NODE_6453_length_490_cov_2.523077_g5307_i0 PRJNA414036 6453 490 2.523077 12.3630773 Didymodactylos carnosus 1234261 Rotifera other_Eukaryota 103 2.94e-22   NR CAF0777251.1 1234261 g5307 i0 50 0.83265306122449 136 49 71.6 1 358 8 31 166 CAF0777251.1 unnamed protein product [Didymodactylos carnosus] diamond 408 103 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Didymodactylos Didymodactylos carnosus
30770811 30770811 PRJNA414036_P_NODE_24934_length_303_cov_6.156716_g23200_i0 PRJNA414036 24934 303 6.156716 18.65484948 Rotaria sp. Silwood2 2762512 Rotifera other_Eukaryota 55.5 2.42e-6   NR CAF2631191.1 2762512 g23200 i0 52.8 2.06930693069307 53 16 52.5 1 9 167 119 162 CAF2631191.1 unnamed protein product [Rotaria sp. Silwood2] diamond 627 55.5 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sp. Silwood2
31055304 31055304 PRJNA414036_P_NODE_57575_length_226_cov_2.905759_g55836_i0 PRJNA414036 57575 226 2.905759 6.56701534 Seison nebaliae 104778 Rotifera other_Eukaryota 58.5 7.91e-8   NR KAI3380873.1 104778 g55836 i0 69.4 0.823008849557522 62 19 82.3 0 225 40 293 354 KAI3380873.1 hypothetical protein SNEBB_002393 [Seison nebaliae] diamond 186 58.5 1 Eukaryota Opisthokonta Metazoa Rotifera Pararotatoria Seisonacea Seisonidae Seison Seison nebaliae
31261320 31261320 PRJNA414036_P_NODE_37815_length_240_cov_2.395122_g36076_i0 PRJNA414036 37815 240 2.395122 5.7482928 Metazoa 33208 Rotifera other_Eukaryota 50.8 3.39e-6   NR RNA22471.1 10195 g36076 i0 51.9 1.2875 52 25 65 0 158 3 1 52 RNA22471.1 hypothetical protein BpHYR1_008317 [Brachionus plicatilis] diamond 309 50.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
31845463 31845463 PRJNA414036_P_NODE_39717_length_233_cov_5.378788_g37978_i0 PRJNA414036 39717 233 5.378788 12.53257604 Brachionus plicatilis 10195 Rotifera other_Eukaryota 40.8 0.0341   NR RNA31288.1 10195 g37978 i0 65.5 0.373390557939914 29 10 37.3 0 132 218 10 38 RNA31288.1 hypothetical protein BpHYR1_033882 [Brachionus plicatilis] diamond 87 40.8 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
32242239 32242239 PRJNA414036_P_NODE_20198_length_336_cov_2.684385_g18472_i0 PRJNA414036 20198 336 2.684385 9.0195336 Opisthokonta 33154 Rotifera other_Eukaryota 51.2 9.32e-5   NR CAF5178429.1 392030 g18472 i0 61.4 8.125 44 17 39.3 0 19 150 21 64 CAF5178429.1 unnamed protein product, partial [Rotaria magnacalcarata] diamond 2730 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria magnacalcarata
32320539 32320539 PRJNA414036_P_NODE_59259_length_219_cov_4.750000_g57520_i0 PRJNA414036 59259 219 4.75 10.4025 Brachionus plicatilis 10195 Rotifera other_Eukaryota 52.4 2.93e-6   NR RNA03377.1 10195 g57520 i0 50 0.958904109589041 70 35 95.9 0 210 1 66 135 RNA03377.1 hypothetical protein BpHYR1_007152 [Brachionus plicatilis] diamond 210 52.4 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;