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contig_metadata

18 rows where bioproject = "PRJNA414036" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJNA414036 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1082842 1082842 PRJNA414036_P_NODE_25521_length_299_cov_6.500000_g23787_i0 PRJNA414036 25521 299 6.5 19.435 Micavibrio 213485 Bacteria Bacteria 191 5.65e-44   NTclustered gi|469926873|gb|CP003538.1| 349215 g23787 i0 81.435 30.0869565217391 237 40 79 4 6 240 463852 463618 Micavibrio aeruginosavorus EPB, complete genome blastn 8996 191 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
1082987 1082987 PRJNA414036_P_NODE_67401_length_190_cov_7.296774_g65662_i0 PRJNA414036 67401 190 7.296774 13.8638706 Bacteriovorax 146784 Bacteria Bacteria 187 4.29e-43   NTclustered gi|1700689994|gb|CP030035.1| 960 g65662 i0 100 96.9526315789474 101 0 88 0 10 110 1660365 1660465 Bacteriovorax stolpii strain AC01 chromosome, complete genome blastn 18421 187 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
4910908 4910908 PRJNA414036_P_NODE_29344_length_277_cov_11.231405_g27609_i0 PRJNA414036 29344 277 11.231405 31.11099185 Bdellovibrio 958 Bacteria Bacteria 302 2.29e-77   NTclustered gi|2800948966|gb|CP168973.1| 959 g27609 i0 98.817 183.909747292419 169 2 84 0 101 269 816490 816322 Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome blastn 50943 302 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
6186020 6186020 PRJNA414036_P_NODE_58465_length_222_cov_32.085561_g56726_i0 PRJNA414036 58465 222 32.085561 71.22994542 Bdellovibrio 958 Bacteria Bacteria 379 7.949999999999998e-101   NTclustered gi|2800948966|gb|CP168973.1| 959 g56726 i0 99.519 308.846846846847 208 1 94 0 7 214 816529 816322 Bdellovibrio bacteriovorus strain HK2 chromosome, complete genome blastn 68564 379 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
7460848 7460848 PRJNA414036_P_NODE_40806_length_231_cov_5.897959_g39067_i0 PRJNA414036 40806 231 5.897959 13.62428529 Bacteriovorax 146784 Bacteria Bacteria 122 1.55e-23   NTclustered gi|1700689994|gb|CP030035.1| 960 g39067 i0 92.857 5.74025974025974 84 6 65 0 139 222 1661747 1661830 Bacteriovorax stolpii strain AC01 chromosome, complete genome blastn 1326 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
7460922 7460922 PRJNA414036_P_NODE_68506_length_187_cov_5.111842_g66767_i0 PRJNA414036 68506 187 5.111842 9.55914454 Bdellovibrio 958 Bacteria Bacteria 117 5.600000000000001e-22   NTclustered gi|2801803968|gb|CP169237.1| 959 g66767 i0 93.59 2.0855614973262 78 5 42 0 101 178 945130 945207 Bdellovibrio bacteriovorus strain Bd3 chromosome, complete genome blastn 390 117 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
8072104 8072104 PRJNA414036_P_NODE_65427_length_196_cov_27.409938_g63688_i0 PRJNA414036 65427 196 27.409938 53.72347848 Bdellovibrio sp. NC01 2220073 Bacteria Bacteria 292 9.18e-75   NTclustered gi|1700686220|gb|CP030034.1| 2220073 g63688 i0 96.591 78.3163265306122 176 6 90 0 10 185 861324 861499 Bdellovibrio sp. NC01 chromosome, complete genome blastn 15350 292 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. NC01
8735695 8735695 PRJNA414036_P_NODE_12287_length_408_cov_10.865952_g10682_i0 PRJNA414036 12287 408 10.865952 44.33308416 Bdellovibrio 958 Bacteria Bacteria 252 3.6e-62   NTclustered gi|2800917394|gb|CP168972.1| 959 g10682 i0 88.208 37.3039215686275 212 24 69 1 94 305 750244 750454 Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome blastn 15220 252 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
10010925 10010925 PRJNA414036_P_NODE_15068_length_380_cov_11.055072_g13387_i0 PRJNA414036 15068 380 11.055072 42.0092736 Bdellovibrio 958 Bacteria Bacteria 241 7.2e-59   NTclustered gi|2800917394|gb|CP168972.1| 959 g13387 i0 88.208 101.802631578947 212 11 71 6 79 277 750244 750454 Bdellovibrio bacteriovorus strain Bd19 chromosome, complete genome blastn 38685 241 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
11897664 11897664 PRJNA414036_P_NODE_67510_length_190_cov_2.703226_g65771_i0 PRJNA414036 67510 190 2.703226 5.1361294 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 178 2.58e-40   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g65771 i0 86.792 5.82105263157895 159 21 84 0 27 185 3446858 3446700 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 1106 178 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
12561631 12561631 PRJNA414036_P_NODE_40990_length_231_cov_5.535714_g39251_i0 PRJNA414036 40990 231 5.535714 12.78749934 Bacteriovorax 146784 Bacteria Bacteria 122 1.55e-23   NTclustered gi|1700689994|gb|CP030035.1| 960 g39251 i0 100 138.761904761905 66 0 58 0 157 222 1662149 1662214 Bacteriovorax stolpii strain AC01 chromosome, complete genome blastn 32054 122 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax stolpii
16996113 16996113 PRJNA414036_P_NODE_1674_length_658_cov_400.528090_g1327_i0 PRJNA414036 1674 658 400.52809 2635.4748322 Halobacteriovorax sp. BALOs_7 2109558 Bacteria Bacteria 156 4.85e-33   NTclustered gi|1486380477|gb|CP027772.1| 2109558 g1327 i0 82.258 100.969604863222 186 28 28 5 161 344 250102 250284 Halobacteriovorax sp. BALOs_7 chromosome, complete genome blastn 66438 156 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax sp. BALOs_7
18270277 18270277 PRJNA414036_P_NODE_1675_length_658_cov_393.850722_g1328_i0 PRJNA414036 1675 658 393.850722 2591.53775076 Halobacteriovorax sp. BALOs_7 2109558 Bacteria Bacteria 156 4.85e-33   NTclustered gi|1486380477|gb|CP027772.1| 2109558 g1328 i0 82.258 94.1884498480243 186 28 28 5 315 498 250284 250102 Halobacteriovorax sp. BALOs_7 chromosome, complete genome blastn 61976 156 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax sp. BALOs_7
22759895 22759895 PRJNA414036_P_NODE_36098_length_246_cov_9.924171_g34362_i0 PRJNA414036 36098 246 9.924171 24.41346066 Micavibrio 213485 Bacteria Bacteria 121 6.01e-23   NTclustered gi|469926873|gb|CP003538.1| 349215 g34362 i0 95.946 87.3455284552846 74 3 30 0 10 83 464682 464755 Micavibrio aeruginosavorus EPB, complete genome blastn 21487 121 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
29128448 29128448 PRJNA414036_P_NODE_67709_length_189_cov_18.272727_g65970_i0 PRJNA414036 67709 189 18.272727 34.53545403 Micavibrio sp. 2024841 Bacteria Bacteria 41.2 0.0133   NR MDB5491878.1 2024841 g65970 i0 67.7 0.492063492063492 31 10 49.2 0 2 94 53 83 MDB5491878.1 uncharacterized protein [Micavibrio sp.] diamond 93 41.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio sp.
29191452 29191452 PRJNA414036_P_NODE_47709_length_231_cov_2.653061_g45970_i0 PRJNA414036 47709 231 2.653061 6.12857091 Bacteriovorax antarcticus 3088717 Bacteria Bacteria 50.8 4.22e-5   NR WP_323574562.1 3088717 g45970 i0 95.5 0.285714285714286 22 1 28.6 0 9 74 213 234 WP_323574562.1 homogentisate 1,2-dioxygenase [Bacteriovorax antarcticus] diamond 66 50.8 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Bacteriovorax Bacteriovorax antarcticus
30580856 30580856 PRJNA414036_P_NODE_45893_length_231_cov_3.061224_g44154_i0 PRJNA414036 45893 231 3.061224 7.07142744 Oligoflexus sp. 1971216 Bacteria Bacteria 43.1 0.0237   NR MBC7659921.1 1971216 g44154 i0 85.7 0.272727272727273 21 3 27.3 0 160 222 38 58 MBC7659921.1 trypsin-like serine protease [Oligoflexus sp.] diamond 63 43.1 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.
32305506 32305506 PRJNA414036_P_NODE_42199_length_231_cov_4.418367_g40460_i0 PRJNA414036 42199 231 4.418367 10.20642777 Pseudomonadati 3379134 Bacteria Bacteria 45.1 0.00182   NR MBC7531827.1 1971216 g40460 i0 86.4 1.14285714285714 22 3 28.6 0 157 222 44 65 MBC7531827.1 hypothetical protein [Oligoflexus sp.] diamond 264 45.1 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae Oligoflexus Oligoflexus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;