contig_metadata
11 rows where bioproject = "PRJNA414036", tax_kingdom = "Pseudomonadati" and tax_phylum = "Thermodesulfobacteriota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1693678 | 1693678 | PRJNA414036_P_NODE_80222_length_162_cov_5.551181_g78483_i0 | PRJNA414036 | 80222 | 162 | 5.551181 | 8.99291322 | Candidatus Desulfofervidus auxilii | 1621989 | Bacteria | Bacteria | 84.2 | 4.78e-12 | NTclustered | gi|1001906061|gb|CP013015.1| | 1621989 | g78483 | i0 | 85.366 | 0.506172839506173 | 82 | 10 | 50 | 2 | 8 | 88 | 265723 | 265643 | Candidatus Desulfofervidus auxilii strain HS1 genome | blastn | 82 | 84.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Candidatus Desulfofervidia | Candidatus Desulfofervidales | Candidatus Desulfofervidaceae | Candidatus Desulfofervidus | Candidatus Desulfofervidus auxilii | ||
| 5522486 | 5522486 | PRJNA414036_P_NODE_27445_length_287_cov_1832.051587_g25710_i0 | PRJNA414036 | 27445 | 287 | 1832.051587 | 5257.98805469 | Geobacter benzoatilyticus | 2815309 | Bacteria | Bacteria | 255 | 1.88e-63 | NTclustered | gi|2004017374|gb|CP071382.1| | 2815309 | g25710 | i0 | 83.333 | 209.020905923345 | 282 | 41 | 97 | 5 | 1 | 278 | 488885 | 489164 | Geobacter benzoatilyticus strain Jerry-YX chromosome, complete genome | blastn | 59989 | 255 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Geobacterales | Geobacteraceae | Geobacter | Geobacter benzoatilyticus | ||
| 7460891 | 7460891 | PRJNA414036_P_NODE_55726_length_230_cov_16.441026_g53987_i0 | PRJNA414036 | 55726 | 230 | 16.441026 | 37.8143598 | Desulfotalea | 109168 | Bacteria | Bacteria | 69.4 | 2.04e-7 | NTclustered | gi|470490570|ref|NR_076996.1| | 84980 | g53987 | i0 | 91.837 | 33.8434782608696 | 49 | 4 | 21 | 0 | 10 | 58 | 657 | 609 | Desulfotalea psychrophila strain LSv54 23S ribosomal RNA gene, complete sequence | blastn | 7784 | 69.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfotalea | Desulfotalea psychrophila | ||
| 11286173 | 11286173 | PRJNA414036_P_NODE_22929_length_316_cov_17.711744_g21198_i0 | PRJNA414036 | 22929 | 316 | 17.711744 | 55.96911104 | Thermodesulfobacteriota | 200940 | Bacteria | Bacteria | 156 | 2.19e-33 | NTclustered | gi|470481149|ref|NR_076457.1| | 119484 | g21198 | i0 | 79.204 | 16.0917721518987 | 226 | 46 | 72 | 1 | 83 | 308 | 2327 | 2551 | Syntrophobacter fumaroxidans strain MPOB 23S ribosomal RNA gene, complete sequence | blastn | 5085 | 156 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Syntrophobacteria | Syntrophobacterales | Syntrophobacteraceae | Syntrophobacter | Syntrophobacter fumaroxidans | ||
| 13172555 | 13172555 | PRJNA414036_P_NODE_68451_length_187_cov_68.815789_g66712_i0 | PRJNA414036 | 68451 | 187 | 68.815789 | 128.68552543 | uncultured Desulfobacterium sp. | 201089 | Bacteria | Bacteria | 104 | 4.36e-18 | NTclustered | gi|2621785015|emb|OY781473.1| | 201089 | g66712 | i0 | 77.778 | 55.5080213903743 | 171 | 36 | 90 | 2 | 17 | 185 | 2493372 | 2493202 | MAG: uncultured Desulfobacterium sp. isolate b5edb3ca-a369-423b-9e9e-493c49de4e5b genome assembly, chromosome: 1 | blastn | 10380 | 104 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteriaceae | Desulfobacterium | uncultured Desulfobacterium sp. | ||
| 15721353 | 15721353 | PRJNA414036_P_NODE_22893_length_317_cov_2.173759_g21162_i0 | PRJNA414036 | 22893 | 317 | 2.173759 | 6.89081603 | Caldimicrobium thiodismutans | 1653476 | Bacteria | Bacteria | 52.8 | 0.03 | NTclustered | gi|972621738|dbj|AP014945.1| | 1653476 | g21162 | i0 | 100 | 0.0883280757097792 | 28 | 0 | 9 | 0 | 71 | 98 | 1388530 | 1388557 | Caldimicrobium thiodismutans DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Thermodesulfobacteria | Thermodesulfobacteriales | Thermodesulfobacteriaceae | Caldimicrobium | Caldimicrobium thiodismutans | ||
| 18270418 | 18270418 | PRJNA414036_P_NODE_64815_length_198_cov_24.871166_g63076_i0 | PRJNA414036 | 64815 | 198 | 24.871166 | 49.24490868 | uncultured Desulforhopalus sp. | 218291 | Bacteria | Bacteria | 60.2 | 1.03e-4 | NTclustered | gi|2621785518|emb|OY781976.1| | 218291 | g63076 | i0 | 84.615 | 1.64141414141414 | 65 | 5 | 33 | 4 | 74 | 138 | 1357010 | 1357069 | MAG: uncultured Desulforhopalus sp. isolate bb11d97f-aff7-40c5-8ccb-5babbf234ee9 genome assembly, chromosome: 1 | blastn | 325 | 60.2 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulforhopalus | uncultured Desulforhopalus sp. | ||
| 19544608 | 19544608 | PRJNA414036_P_NODE_5316_length_514_cov_96.661795_g1827_i2 | PRJNA414036 | 5316 | 514 | 96.661795 | 496.8416263 | uncultured Mailhella sp. | 1981031 | Bacteria | Bacteria | 213 | 2.18e-50 | NTclustered | gi|2729058701|emb|OZ007001.1| | 1981031 | g1827 | i2 | 75.806 | 119.509727626459 | 496 | 79 | 94 | 34 | 20 | 504 | 1893422 | 1893887 | MAG: uncultured Mailhella sp. isolate metabat2_pooled_hifiasm.920 MAG genome assembly, chromosome: 1 | blastn | 61428 | 213 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfovibrionia | Desulfovibrionales | Desulfovibrionaceae | Mailhella | uncultured Mailhella sp. | ||
| 22759886 | 22759886 | PRJNA414036_P_NODE_34398_length_253_cov_15.082569_g32662_i0 | PRJNA414036 | 34398 | 253 | 15.082569 | 38.15889957 | Desulfotalea | 109168 | Bacteria | Bacteria | 69.4 | 2.28e-7 | NTclustered | gi|470490570|ref|NR_076996.1| | 84980 | g32662 | i0 | 91.837 | 30.7667984189723 | 49 | 4 | 19 | 0 | 10 | 58 | 657 | 609 | Desulfotalea psychrophila strain LSv54 23S ribosomal RNA gene, complete sequence | blastn | 7784 | 69.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobulbia | Desulfobulbales | Desulfocapsaceae | Desulfotalea | Desulfotalea psychrophila | ||
| 25309141 | 25309141 | PRJNA414036_P_NODE_76200_length_169_cov_9.141791_g74461_i0 | PRJNA414036 | 76200 | 169 | 9.141791 | 15.44962679 | Desulfuromonas | 890 | Bacteria | Bacteria | 126 | 8.2e-25 | NTclustered | gi|662020026|ref|NR_121913.1| | 891 | g74461 | i0 | 80.357 | 65.2189349112426 | 168 | 32 | 99 | 1 | 2 | 168 | 2817 | 2650 | Desulfuromonas acetoxidans strain DSM 684 23S ribosomal RNA gene, complete sequence | blastn | 11022 | 126 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfuromonadia | Desulfuromonadales | Desulfuromonadaceae | Desulfuromonas | Desulfuromonas acetoxidans | ||
| 30391985 | 30391985 | PRJNA414036_P_NODE_65213_length_197_cov_4.104938_g63474_i0 | PRJNA414036 | 65213 | 197 | 4.104938 | 8.08672786 | uncultured Desulfobacterium sp. | 201089 | Bacteria | Bacteria | 52.4 | 1.21e-6 | NR | CBX28569.1 | 201089 | g63474 | i0 | 50.9 | 0.868020304568528 | 57 | 28 | 86.8 | 0 | 187 | 17 | 13 | 69 | CBX28569.1 hypothetical protein N47_G38930 [uncultured Desulfobacterium sp.] | diamond | 171 | 52.4 | 1 | Bacteria | Pseudomonadati | Thermodesulfobacteriota | Desulfobacteria | Desulfobacterales | Desulfobacteriaceae | Desulfobacterium | uncultured Desulfobacterium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;