RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA414036", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA414036 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19544654 19544654 PRJNA414036_P_NODE_77856_length_166_cov_20.213740_g76117_i0 PRJNA414036 77856 166 20.21374 33.5548084 Cryptomycota sp. 2012228 Fungi Fungi 60.2 8.31e-5   NTclustered gi|2468791035|gb|OQ702926.1| 2012228 g76117 i0 97.143 0.409638554216867 35 1 21 0 124 158 4263 4297 Cryptomycota sp. isolate PSC258 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 68 60.2 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
20820538 20820538 PRJNA414036_P_NODE_77857_length_166_cov_20.099237_g76118_i0 PRJNA414036 77857 166 20.099237 33.36473342 Cryptomycota sp. 2012228 Fungi Fungi 60.2 8.31e-5   NTclustered gi|2468791035|gb|OQ702926.1| 2012228 g76118 i0 97.143 0.409638554216867 35 1 21 0 124 158 4263 4297 Cryptomycota sp. isolate PSC258 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 68 60.2 1 Eukaryota Opisthokonta Fungi Cryptomycota         Cryptomycota sp.
29601493 29601493 PRJNA414036_P_NODE_52530_length_231_cov_1.790816_g50791_i0 PRJNA414036 52530 231 1.790816 4.13678496 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 47 0.00103   NR PJF20167.1 1246581 g50791 i0 74.1 79.9350649350649 27 7 35.1 0 91 11 450 476 PJF20167.1 DNA-directed RNA polymerase subunit [Paramicrosporidium saccamoebae] diamond 18465 47 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;