RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA414036", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 7 ✖

tax_kingdom 1

  • Bacillati · 7 ✖

bioproject 1

  • PRJNA414036 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6186039 6186039 PRJNA414036_P_NODE_73825_length_174_cov_3.517986_g72086_i0 PRJNA414036 73825 174 3.517986 6.12129564 Chloroflexota 200795 Bacteria Bacteria 62.1 2.43e-5   NTclustered gi|1446038753|dbj|AP018437.1| 913107 g72086 i0 91.111 2.48275862068966 45 4 26 0 77 121 3507514 3507470 Pelolinea submarina MO-CFX1 DNA, complete genome blastn 432 62.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae Pelolinea Pelolinea submarina
10622634 10622634 PRJNA414036_P_NODE_40989_length_231_cov_5.535714_g39250_i0 PRJNA414036 40989 231 5.535714 12.78749934 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 124 4.31e-24   NTclustered gi|2874253835|emb|OY969885.1| 1672391 g39250 i0 100 53.1991341991342 67 0 54 0 9 75 2093868 2093802 MAG: uncultured Chloroflexia bacterium isolate MFD01275.bin.c.5 genome assembly, chromosome: 1 blastn 12289 124 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
10622701 10622701 PRJNA414036_P_NODE_65089_length_198_cov_1.533742_g63350_i0 PRJNA414036 65089 198 1.533742 3.03680916 Caldilineaceae bacterium 2614250 Bacteria Bacteria 54.7 0.005   NTclustered gi|2575803493|emb|OY729430.1| 2614250 g63350 i0 94.286 0.176767676767677 35 2 18 0 45 79 2718851 2718817 MAG: Caldilineaceae bacterium isolate ee78b5b4-03fb-4fb3-b3ee-46148e6ffba5 genome assembly, chromosome: 1 blastn 35 54.7 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
18270400 18270400 PRJNA414036_P_NODE_59295_length_219_cov_3.347826_g57556_i0 PRJNA414036 59295 219 3.347826 7.33173894 uncultured Chloroflexota bacterium 166587 Bacteria Bacteria 52.8 0.019   NTclustered gi|2531948664|emb|OY282448.1| 166587 g57556 i0 96.774 0.141552511415525 31 1 14 0 77 107 2500019 2499989 MAG: uncultured Chloroflexota bacterium genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria   Bacillati Chloroflexota         uncultured Chloroflexota bacterium
27913258 27913258 PRJNA414036_P_NODE_36865_length_243_cov_19.798077_g35129_i0 PRJNA414036 36865 243 19.798077 48.10932711 FCB group 1783270 Bacteria Bacteria 75.9 4e-16   NR RZP14462.1 2026724 g35129 i0 70.4 10.9382716049383 54 16 66.7 0 162 1 6 59 RZP14462.1 MAG: hypothetical protein EVA32_02495 [Chloroflexota bacterium] diamond 2658 75.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31908860 31908860 PRJNA414036_P_NODE_19897_length_338_cov_4.808581_g18172_i0 PRJNA414036 19897 338 4.808581 16.25300378 Chloroflexota bacterium 2026724 Bacteria Bacteria 57.4 7.74e-7   NR MSP12752.1 2026724 g18172 i0 71.7 3.25739644970414 46 13 40.8 0 3 140 238 283 MSP12752.1 F0F1 ATP synthase subunit beta [Chloroflexota bacterium] diamond 1101 57.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32541923 32541923 PRJNA414036_P_NODE_27659_length_286_cov_75.366534_g25924_i0 PRJNA414036 27659 286 75.366534 215.54828724 Anaerolineales bacterium 2073117 Bacteria Bacteria 43.1 0.0451   NR MCU0487625.1 2073117 g25924 i0 32.1 0.555944055944056 53 36 55.6 0 168 10 270 322 MCU0487625.1 hypothetical protein [Anaerolineales bacterium] diamond 159 43.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;