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contig_metadata

7 rows where bioproject = "PRJNA414036", tax_clade = "Sar" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA414036 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11897692 11897692 PRJNA414036_P_NODE_7950_length_464_cov_5.398601_g6626_i0 PRJNA414036 7950 464 5.398601 25.04950864 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.013   NTclustered gi|829125522|ref|XM_001008654.2| 312017 g6626 i0 90.244 0.0883620689655172 41 4 9 0 73 113 2623 2663 Tetrahymena thermophila SB210 cation channel family protein partial mRNA blastn 41 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
16385332 16385332 PRJNA414036_P_NODE_42833_length_231_cov_4.081633_g41094_i0 PRJNA414036 42833 231 4.081633 9.42857223 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 122 1.55e-23   NTclustered gi|759083543|gb|KM222160.1| 5980 g41094 i0 100 30.9437229437229 66 0 58 0 10 75 714 649 Colpoda inflata voucher SXK2011071402 large subunit ribosomal RNA gene, partial sequence blastn 7148 122 1 Eukaryota Sar   Ciliophora Colpodea Colpodida Colpodidae Colpoda Colpoda inflata
27028931 27028931 PRJNA414036_P_NODE_64522_length_199_cov_40.591463_g62783_i0 PRJNA414036 64522 199 40.591463 80.77701137 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.5 1.13e-8   NR BAD16636.1 6009 g62783 i0 51.6 3.28643216080402 62 30 93.5 0 4 189 54 115 BAD16636.1 actin [Loxodes striatus] diamond 654 60.8 0.995065789473684 Eukaryota Sar   Ciliophora Karyorelictea Loxodida Loxodidae Loxodes Loxodes striatus
28734444 28734444 PRJNA414036_P_NODE_6747_length_484_cov_5.991091_g4361_i1 PRJNA414036 6747 484 5.991091 28.99688044 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 57.4 3.8e-6   NR CAI2374945.1 5936 g4361 i1 47.6 54.2789256198347 63 33 39 0 305 117 788 850 CAI2374945.1 unnamed protein product [Moneuplotes crassus] diamond 26271 57.8 0.993079584775087 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
31845462 31845462 PRJNA414036_P_NODE_36337_length_245_cov_43.338095_g34601_i0 PRJNA414036 36337 245 43.338095 106.17833275 Halteria grandinella 5974 SAR_Eukaryotes SAR_Eukaryotes 41.2 0.0456   NR TNV71298.1 5974 g34601 i0 74.1 0.330612244897959 27 7 33.1 0 125 205 38 64 TNV71298.1 hypothetical protein FGO68_gene13477 [Halteria grandinella] diamond 81 41.2 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Halteriidae Halteria Halteria grandinella
32747295 32747295 PRJNA414036_P_NODE_4060_length_547_cov_1154.476562_g3290_i0 PRJNA414036 4060 547 1154.476562 6314.98679414 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87 3.68e-16   NR CDW75723.1 5949 g3290 i0 63.2 2.42961608775137 76 28 41.7 0 318 545 261 336 CDW75723.1 UNKNOWN [Stylonychia lemnae] diamond 1329 87.4 0.995423340961098 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32841672 32841672 PRJNA414036_P_NODE_26000_length_296_cov_4.846743_g24266_i0 PRJNA414036 26000 296 4.846743 14.34635928 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 53.1 1.6e-5   NR CDW75723.1 5949 g24266 i0 60 1.07432432432432 40 16 40.5 0 176 295 90 129 CDW75723.1 UNKNOWN [Stylonychia lemnae] diamond 318 53.5 0.992523364485981 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;