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contig_metadata

21 rows where bioproject = "PRJNA414036", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 21 ✖

tax_clade 1

  • Amoebozoa · 21 ✖

bioproject 1

  • PRJNA414036 · 21 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
418666 418666 PRJNA414036_P_NODE_14941_length_381_cov_80.179191_g13261_i0 PRJNA414036 14941 381 80.179191 305.48271771 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 326 1.94e-84   NTclustered gi|511487963|gb|JX898537.1| 1260765 g13261 i0 86.23 14.9186351706037 305 36 80 5 69 371 107 407 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 5684 326 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
1082819 1082819 PRJNA414036_P_NODE_14421_length_386_cov_30.726496_g12748_i0 PRJNA414036 14421 386 30.726496 118.60427456 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 270 9.35e-68   NTclustered gi|399764274|gb|JQ271785.1| 1215994 g12748 i0 86.1 35.3367875647668 259 26 66 8 9 263 375 627 Tubulinea group 04 sp. BCHM5 18S ribosomal RNA gene, partial sequence blastn 13640 270 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. BCHM5
1082903 1082903 PRJNA414036_P_NODE_4201_length_543_cov_21.314961_g3411_i0 PRJNA414036 4201 543 21.314961 115.74023823 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 270 1.3499999999999999e-67   NTclustered gi|399764274|gb|JQ271785.1| 1215994 g3411 i0 86.1 26.572744014733 259 26 47 9 124 378 627 375 Tubulinea group 04 sp. BCHM5 18S ribosomal RNA gene, partial sequence blastn 14429 270 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. BCHM5
2969449 2969449 PRJNA414036_P_NODE_34863_length_251_cov_34.555556_g33127_i0 PRJNA414036 34863 251 34.555556 86.73444556 Tubulinea group 04 sp. PPD16 1215999 Tubulinea other_Eukaryota 219 2.1199999999999998e-52   NTclustered gi|399764279|gb|JQ271790.1| 1215999 g33127 i0 84.519 37.6932270916335 239 17 93 8 9 242 1568 1791 Tubulinea group 04 sp. PPD16 18S ribosomal RNA gene, partial sequence blastn 9461 219 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. PPD16
4910923 4910923 PRJNA414036_P_NODE_3364_length_569_cov_107.897004_g103_i2 PRJNA414036 3364 569 107.897004 613.93395276 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 178 8.869999999999999e-40   NTclustered gi|300078497|gb|GU001159.1| 200886 g103 i2 91.473 20.8242530755712 129 11 23 0 204 332 2897 3025 Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11849 178 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
5522463 5522463 PRJNA414036_P_NODE_21885_length_323_cov_320.895833_g20157_i0 PRJNA414036 21885 323 320.895833 1036.49354059 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 370 7.37e-98   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g20157 i0 98.113 27.2755417956656 212 4 66 0 9 220 1598 1387 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 8810 370 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
6796483 6796483 PRJNA414036_P_NODE_35846_length_247_cov_37.070755_g34110_i0 PRJNA414036 35846 247 37.070755 91.56476485 Tubulinea group 04 sp. PPD16 1215999 Tubulinea other_Eukaryota 204 5.819999999999998e-48   NTclustered gi|399764279|gb|JQ271790.1| 1215999 g34110 i0 84.052 39.7246963562753 232 16 93 6 10 238 1784 1571 Tubulinea group 04 sp. PPD16 18S ribosomal RNA gene, partial sequence blastn 9812 204 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. PPD16
7460903 7460903 PRJNA414036_P_NODE_60286_length_215_cov_4.066667_g58547_i0 PRJNA414036 60286 215 4.066667 8.74333405 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 219 1.77e-52   NTclustered gi|399764264|gb|JQ271775.1| 1215986 g58547 i0 86.432 38.1581395348837 199 27 93 0 8 206 597 399 Tubulinea group 02 sp. 1HFKJ 18S ribosomal RNA gene, partial sequence blastn 8204 219 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. 1HFKJ
8071995 8071995 PRJNA414036_P_NODE_2887_length_587_cov_113.817029_g2305_i0 PRJNA414036 2887 587 113.817029 668.10596023 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 503 1.33e-137   NTclustered gi|511487963|gb|JX898537.1| 1260765 g2305 i0 89.104 27.8177172061329 413 33 69 11 171 577 1 407 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 16329 503 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
8072029 8072029 PRJNA414036_P_NODE_40307_length_231_cov_74.025510_g38568_i0 PRJNA414036 40307 231 74.02551 170.9989281 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 209 1.16e-49   NTclustered gi|511487963|gb|JX898537.1| 1260765 g38568 i0 93.056 5.97402597402597 144 8 87 2 1 143 265 407 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 1380 209 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
9346805 9346805 PRJNA414036_P_NODE_15348_length_377_cov_86.514620_g13663_i0 PRJNA414036 15348 377 86.51462 326.1601174 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 641 1.68e-179   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g13663 i0 98.889 66.6604774535809 360 3 95 1 10 368 1549 1908 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 25131 641 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
9346865 9346865 PRJNA414036_P_NODE_2768_length_593_cov_90.259857_g46_i9 PRJNA414036 2768 593 90.259857 535.24095201 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 1053 0   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g46 i9 99.313 44.8971332209106 582 4 98 0 10 591 602 21 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 26624 1053 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
14447697 14447697 PRJNA414036_P_NODE_58232_length_223_cov_10.111702_g56493_i0 PRJNA414036 58232 223 10.111702 22.54909546 Tubulinea group 04 sp. PPD16 1215999 Tubulinea other_Eukaryota 243 1.09e-59   NTclustered gi|399764279|gb|JQ271790.1| 1215999 g56493 i0 87.864 11.0313901345291 206 25 92 0 9 214 448 243 Tubulinea group 04 sp. PPD16 18S ribosomal RNA gene, partial sequence blastn 2460 243 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. PPD16
18270259 18270259 PRJNA414036_P_NODE_1335_length_688_cov_77.237366_g46_i5 PRJNA414036 1335 688 77.237366 531.39307808 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 1072 0   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g46 i5 99.491 38.7936046511628 589 3 86 0 91 679 14 602 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 26690 1072 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
19544549 19544549 PRJNA414036_P_NODE_38816_length_236_cov_6.592040_g37077_i0 PRJNA414036 38816 236 6.59204 15.5572144 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 239 1.5100000000000002e-58   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g37077 i0 85.841 4.30508474576271 226 31 95 1 7 231 735 960 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 1016 239 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
20209013 20209013 PRJNA414036_P_NODE_11056_length_422_cov_5.434109_g9496_i0 PRJNA414036 11056 422 5.434109 22.93193998 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 3.98e-17   NTclustered gi|399764264|gb|JQ271775.1| 1215986 g9496 i0 86.17 1.78199052132701 94 13 22 0 216 309 1160 1253 Tubulinea group 02 sp. 1HFKJ 18S ribosomal RNA gene, partial sequence blastn 752 102 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. 1HFKJ
20820324 20820324 PRJNA414036_P_NODE_13217_length_398_cov_6.831956_g11581_i0 PRJNA414036 13217 398 6.831956 27.19118488 Tubulinea group 04 sp. PPD16 1215999 Tubulinea other_Eukaryota 148 4.73e-31   NTclustered gi|399764279|gb|JQ271790.1| 1215999 g11581 i0 84.564 1.86683417085427 149 23 37 0 41 189 812 960 Tubulinea group 04 sp. PPD16 18S ribosomal RNA gene, partial sequence blastn 743 148 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 04 sp. PPD16
21484738 21484738 PRJNA414036_P_NODE_897_length_745_cov_106.049296_g103_i1 PRJNA414036 897 745 106.049296 790.0672552 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 178 1.18e-39   NTclustered gi|300078497|gb|GU001159.1| 200886 g103 i1 91.473 15.9046979865772 129 11 17 0 238 366 3025 2897 Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11849 178 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
23370786 23370786 PRJNA414036_P_NODE_2579_length_602_cov_89.093474_g46_i7 PRJNA414036 2579 602 89.093474 536.34271348 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 1027 0   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g46 i7 98.456 28.0265780730897 583 9 97 0 10 592 596 14 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 16872 1027 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388
24645029 24645029 PRJNA414036_P_NODE_10220_length_432_cov_42.735516_g8701_i0 PRJNA414036 10220 432 42.735516 184.61742912 uncultured Rhizamoeba 1260765 Tubulinea other_Eukaryota 209 2.34e-49   NTclustered gi|511487963|gb|JX898537.1| 1260765 g8701 i0 93.056 3.05787037037037 144 8 33 2 290 432 407 265 Uncultured Rhizamoeba clone HCA_D03-34 28S ribosomal RNA gene, partial sequence blastn 1321 209 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae   uncultured Rhizamoeba
24645090 24645090 PRJNA414036_P_NODE_2580_length_602_cov_88.970018_g46_i8 PRJNA414036 2580 602 88.970018 535.59950836 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 1044 0   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g46 i8 98.971 36.5797342192691 583 6 97 0 10 592 596 14 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 22021 1044 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;